Geomonas paludis: M1B72_09825
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Entry
M1B72_09825 CDS
T08160
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gpl
Geomonas paludis
Pathway
gpl01501
beta-Lactam resistance
gpl01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1B72_09825
01503 Cationic antimicrobial peptide (CAMP) resistance
M1B72_09825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gpl02000
]
M1B72_09825
01504 Antimicrobial resistance genes [BR:
gpl01504
]
M1B72_09825
Transporters [BR:
gpl02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M1B72_09825
Antimicrobial resistance genes [BR:
gpl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M1B72_09825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
UPU37985
LinkDB
All DBs
Position
2287235..2290390
Genome browser
AA seq
1051 aa
AA seq
DB search
MSRFFINRPIFAWVIAIAVMLAGLLAMKSLPVSQYPPIAPPQISVNAMYPGASAQTVQDT
VTQVIEQKMNGIDNLLYMSSTSDSAGAVSINLTFKAGTDPNIAQVQVQNKLQLATPLLPQ
VVQKQGVQVVKSTRNFLLIVGIVSEDSSLNRYQLTDYMVSNVQDIISRVEGVGEVTVFGS
QNAMRIWMNPDKLNNYKLTPNDVTTALQAQNAQVSAGQFGGMPAMQGQQLNATITARTLL
QNPEQFQEIVLRTNPDGSTVKLRDVAKIDIGTENYDTLARYKGKPVAAMALRLAAGANAL
DTAERVRTKMADLEKFFPAGAKVVYPYDTTPFVKISMEEVVKTLMEAVCLVFIIMFLFLQ
NIRATLIPTIAVPVVLLGTLGVLFAAGFSINTLTMFALVIVIGLLVDDAIVVVENVERIM
TEEGLSPHDATVKSMGQITSALWGIATVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMIL
SVLTAQILTPALCATLLKPVMKGHEPCESGWYCGFFRWFNRMFDKARHKYESIVGNSFGK
PLRYLVFYGCLVGAMVFFFLRLPTAFLPDEDQGFIVCQIQLPAGATQERTIKMLEKVEKH
FLENEKKSVDSLITVAGFSFAGRGQNMGLAFVKLKDWKLRPTPDLKAPAVAGRAMGAFSQ
FRDGMAFAFSPPAVVELGQANGFDFQLQDRGGLGHQALMDARNQLLGMASQNKKLMAVRP
NGQDDTPQFKLNIDDVRAGALGVSLSDINNTLGTAWGSSYVNDFLQNGRVKKVYLQSDAA
YRMVPEDINRWYVRNDKGEMVPFSAFATAKWEHASPRLERYNGIPSTEIMGNAAKGISTG
EAMAEMEAMAAKLPPGISYEWTGLSFEEKNAGRQAPALYAISLLVVFLAVAALYESWSIP
FVNLLMLPLGLVGAVTAVTLRVLPNDIYLQIGLLTTIGLSTKNAILIIQFIKDQLHQGHE
LVEATLTAVKIRLRPVIMTSLAFFFGTLPLALTKGAGAGAQNAIGTAVTGGLLSATFIDL
IFIPFFFVMVTKMFSKKHGSARKAAAAAEVH
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggtttttcataaacagacccatcttcgcctgggtcatcgccatcgcggtcatg
ctggcgggccttttggccatgaagtcgctgccggtctcccagtacccgcccatcgcgccg
ccgcagatctctgtcaacgccatgtacccgggggcttccgcccagacggtgcaggacacg
gtcacccaggtgatcgagcagaagatgaacggcatcgacaacctgctctacatgtcctcc
accagcgactccgcgggcgcggtatccatcaacctgaccttcaaggccgggaccgatccc
aacatcgcccaggtccaggtgcagaacaagctgcagctggccacgccgctgttgccgcag
gtggtgcagaagcagggggtccaggtggtgaaatccacccgtaacttcctgttgatcgtc
ggcatcgtctccgaggacagcagcctcaaccgctatcagttgaccgactacatggtgtcc
aacgtccaggacatcatcagccgcgtcgagggggtgggcgaggtgaccgtgttcggttcc
cagaacgcgatgcgcatctggatgaaccccgacaagctgaacaactacaagctgaccccc
aacgacgttaccaccgcgctgcaggcacaaaacgcgcaggtgtccgcgggccagttcggc
ggcatgccggccatgcaggggcagcagttgaacgccaccatcacggcccggactctcttg
cagaacccggagcagttccaggagatcgtgctgcgcaccaaccccgacggctccaccgtg
aagctcagggacgtggccaagatcgacatcggcaccgagaactacgacacgctggcccgc
tacaaggggaaaccggtggcggccatggcgctcaggcttgccgccggcgccaacgcgctc
gacaccgcggagcgggtcaggaccaagatggcggacctggagaagttcttcccggccggc
gccaaggtcgtgtacccgtacgacaccaccccgttcgtcaagatctcgatggaggaggtg
gtcaagaccctgatggaggcggtctgcctggtcttcatcatcatgttcctcttcctgcag
aacatccgcgccaccctgattccgaccatcgcggtcccggtcgttctgctgggcaccctg
ggcgtgctgttcgctgccggcttctccatcaacaccctgaccatgttcgcactggtcatc
gtcatcggcctgctggtcgacgacgccatcgtcgtggtcgagaacgtggaaaggatcatg
accgaggaggggctctcgccacacgacgcgacggtcaagtcgatggggcagatcacctcg
gccctatggggcatcgccacggtactttcggcggtcttcattccgatggcgttcttcggc
ggctccaccggcgtcatctaccgccagttctccatcaccatcgtttccgccatgatcctg
tcggtgctcaccgcccagatcctgacccccgccctgtgcgccacgctgctgaagccggtg
atgaaggggcacgagccgtgcgagtccgggtggtactgcggcttcttccgctggttcaac
aggatgttcgacaaggcgcgccacaagtacgagtccatcgtcggcaactccttcggcaag
ccgctgcgctacctggtcttctacggctgcctggtcggcgccatggtcttcttcttcctg
cgcctccccaccgcgttcctgccggacgaggaccagggcttcatcgtctgccagatccag
cttccggcgggcgccacccaggagcggaccatcaagatgctcgagaaggtggagaaacac
ttcctggagaacgagaagaagtcggtcgactcgctcattaccgtggcgggcttcagcttc
gccggtcgcggccagaacatgggtcttgccttcgtcaaactcaaagactggaagctgcgc
ccgaccccggacctgaaggcgcccgccgttgccggccgcgccatgggcgccttctcccag
ttccgtgacggcatggccttcgccttctcgccgccggccgttgtcgagctgggccaggcc
aacggcttcgacttccagttgcaggaccgcggcggcctcgggcaccaggcgctcatggac
gccaggaaccagctcctgggcatggccagccagaacaagaagctcatggcggtgcgcccc
aacggccaggacgacaccccgcagttcaagctgaacatcgacgacgtccgcgcaggcgcc
ctgggcgtgtcgctctccgacatcaacaacaccctgggtacggcgtggggctcctcctac
gtcaacgacttcctgcaaaacggcagggtgaagaaggtgtacctgcagtccgatgcggcc
taccgcatggtgcccgaagacatcaacaggtggtacgtgagaaacgacaagggtgagatg
gtacccttctccgccttcgccaccgccaagtgggagcacgcctctccgcgccttgagcgc
tacaacggcatcccgagcaccgagatcatgggcaacgccgccaaggggatctccaccggc
gaggcgatggccgagatggaggccatggccgccaagctccccccggggatcagctacgag
tggaccggcctttccttcgaggagaagaacgcgggcaggcaggcgcccgccctctacgcc
atctcgctgctggtcgtcttcctggccgtcgcggccctctacgagagctggagcatcccg
ttcgtcaacctgctcatgctcccgctgggcctggtcggcgcggtgaccgcggtgacgctg
cgtgtgctccccaacgacatctacctgcagatcggtcttttgaccacgatcggcctgtcg
accaagaacgcgatcctgatcatccagttcatcaaggaccagctgcaccaggggcacgaa
ctggtcgaggcgacgctgaccgccgtcaagatcaggctccgtccggtcatcatgacctcg
ctggccttcttcttcggcacgctgccgcttgcgctcaccaagggggcgggggcgggcgcc
cagaacgccatcggcaccgcggtgaccggcggcctgttgtcggcgaccttcatcgacctt
atcttcatcccgttcttcttcgtcatggtgacgaagatgttctccaagaagcacggatcg
gccagaaaagccgctgccgctgcggaggtgcactag
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