KEGG   Geomonas paludis: M1B72_11935
Entry
M1B72_11935       CDS       T08160                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07712  two-component system, NtrC family, nitrogen regulation response regulator GlnG
Organism
gpl  Geomonas paludis
Pathway
gpl02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gpl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    M1B72_11935
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gpl02022]
    M1B72_11935
Two-component system [BR:gpl02022]
 NtrC family
  GlnL-GlnG (nitrogen regulation)
   M1B72_11935
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_2 AAA_5 HTH_30 AAA Mg_chelatase AAA_3 HTH_50 HTH_17 HTH_1 TrkA_N HTH_7 MCM HTH_20 RWP-RK Xre-like-HTH HTH_29 NUMOD1 HTH_23 DUF5315 HTH_28 nSTAND3 VpsR
Other DBs
NCBI-ProteinID: UPU34160
LinkDB
Position
complement(2820814..2822334)
AA seq 506 aa
MQILIIDDERDVCTFFRRLLTRKGYQVVTAANEPEALAALEAGRFSVALVDLKLPDTDGI
TLLEIIKTRQPSCEVIIMTGYSTVKTAVTAMQLGAYEYLEKPFDDIDQIELMIERAAGAG
LVRGRGLAAADEWAEVAQGVGFRVGVSPPMKRMVSLAYKVAGKDISVLIQGKTGTGKEVL
ARFIHAASARAGQPFIPVNCGALPENLLESELFGHEKGAFTGANQTRRGIFELANNGTLL
LDEIGDATPQIQVKLLRVLETGEFMRVGGERPIKTDVRVIAATNVDLEQAIREKTFREDL
FYRLNVVRLEIPSLAERHEDIPLLAEHFVQQLNRDLRLAPGTVRLLQGYSWPGNIRELAN
VMRRAVVICNGDTILPEHLGGTFLAGPSAPVRSAAQPALRSAEPESFHAGGDLVEQCRSC
ECLDRLGADELTGMLTSLRQAQSNLLAVMRRKKIVPPLHALKDSEAETIKEALSQYDGNI
TEAAKALGIARNTLYRKMKELELPGR
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgcaaatcctgataatcgatgacgagagggacgtgtgcaccttcttccgccgccttttg
acccgcaaggggtaccaggtggtcaccgccgccaacgagcccgaggccctggcggcgctg
gaagcggggcgcttcagcgtcgccctggtggacctgaagctccccgatacggacggcatc
acgctccttgagatcatcaagacgaggcagccctcctgcgaggtgatcatcatgaccggg
tactcgacggtcaagaccgcggtcaccgccatgcagctgggggcctacgagtacctggaa
aagcccttcgacgacatcgaccagatcgagctgatgatcgagcgcgccgccggtgcgggc
ctcgtgcgcggccgggggcttgccgccgccgacgagtgggccgaggtggcccagggggtc
ggtttccgggttggtgtctctccgccgatgaagcgcatggtctccctggcctacaaggtg
gccggcaaggacatctcggtgctgatccagggcaagaccggcaccggcaaggaggtgctg
gcgcgtttcatccatgccgcctccgcccgggccggtcagcccttcatcccggtcaactgc
ggcgcgctgcccgagaacctcttggagagcgagctcttcggtcacgaaaagggcgccttc
accggcgccaaccagacccggcgcggcatcttcgaactggccaacaacgggacgctgctc
ctggacgagatcggcgacgccaccccgcagatccaggtgaagctgttgcgggtgctggag
accggcgagttcatgagggtagggggggagcgtcccatcaagaccgacgtcagggtgatc
gccgccaccaacgtcgacctggagcaggccatcagggagaagaccttccgcgaggacctc
ttttaccggctcaacgtggtgcgcctggagatcccgtcccttgccgagcgtcacgaggac
ataccgctattggcggagcacttcgtgcagcagttgaaccgggatctccggctcgccccg
ggcaccgtgcgccttttgcagggatactcctggcccggcaacatccgcgagctcgccaac
gtgatgcggcgcgccgtggtgatctgtaacggcgacaccatcctccccgagcacctcggg
ggcaccttcctggccgggccttccgccccggtgcgttcggcagcccaaccggcgctgcgt
tccgccgagccggagtcatttcatgccggcggcgacctcgtcgagcaatgtcgcagctgc
gagtgtctggaccggctcggggccgacgaactgaccgggatgctcacctctctgcgccag
gcccagtccaatctgctcgcggtgatgcgcaggaagaagatcgtaccgccgctgcacgcc
ctcaaggactccgaagccgagaccatcaaggaagcgctgagccagtacgacggcaacatc
accgaagccgccaaggccctcggcatcgcgcgcaatactctctataggaagatgaaggag
ttggaactgcccgggcggtag

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