Geomonas paludis: M1B72_12355
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Entry
M1B72_12355 CDS
T08160
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase family protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gpl
Geomonas paludis
Pathway
gpl00521
Streptomycin biosynthesis
gpl00523
Polyketide sugar unit biosynthesis
gpl00541
O-Antigen nucleotide sugar biosynthesis
gpl01100
Metabolic pathways
gpl01110
Biosynthesis of secondary metabolites
gpl01250
Biosynthesis of nucleotide sugars
Module
gpl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gpl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
M1B72_12355
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M1B72_12355
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M1B72_12355
Enzymes [BR:
gpl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
M1B72_12355
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Motif
Pfam:
dTDP_sugar_isom
Cupin_2
FdtA
Cupin_1
GPI
Motif
Other DBs
NCBI-ProteinID:
UPU34242
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Position
complement(2916814..2917302)
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AA seq
162 aa
AA seq
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MNAVQQFTKGRIHDVACKPLKKFLDERGWLTELFRSDELEPEIMPAMSYVSMTQPGVARG
PHEHVEQTDYFCFLGPSNFKVYLWDTREGSPSFGVKQVLYAGVDAPSIVVVPPGVVHAYR
NIGTENGIVFNAPNRLFAGQGKSEPVDEIRHEELVDSPYQLD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtacagcaattcaccaagggacgcatccacgacgtagcctgcaagccgctc
aagaagttcctggacgagaggggatggctcaccgagctgttccgttccgacgagctggag
ccggagatcatgccggcgatgtcctacgtctcgatgacccagccgggcgtggcccgcggg
ccgcacgagcatgtcgagcagaccgactacttctgcttcctgggaccgtccaatttcaag
gtctacctctgggacacccgggaaggctccccgagcttcggggtgaagcaggtgctgtac
gcgggggtggacgccccctccatcgtggtggttcccccgggcgtggtgcatgcctaccgc
aacatcggcaccgagaacggcatcgtcttcaacgcccccaaccgcctttttgccgggcag
ggcaagagtgaaccggtggacgagatccgccacgaggaactggtggactcgccttaccaa
ctggactaa
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