Gimesia panareensis: Pan110_52470
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Entry
Pan110_52470 CDS
T07079
Symbol
inlA_6
Name
(GenBank) Internalin-A precursor
KO
K22615
NLR family CARD domain containing 5
Organism
gpn
Gimesia panareensis
Brite
KEGG Orthology (KO) [BR:
gpn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gpn04054
]
Pan110_52470 (inlA_6)
Pattern recognition receptors [BR:
gpn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
Pan110_52470 (inlA_6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_6
LRR_1
DHU1_N
Pentapeptide_4
Motif
Other DBs
NCBI-ProteinID:
QDU52865
UniProt:
A0A518ADS5
LinkDB
All DBs
Position
6832507..6837090
Genome browser
AA seq
1527 aa
AA seq
DB search
MRFTLSLISGTILLCLLIPAPRAAAAEITRDQAIQAIQSLGGKISYARTDIENKIVSVVF
ASHRITDDQLKPLNQLKDLKQLTFYNARISGLGLKSLTQLKQLQNLEFINCPLKDSAFEH
LEQFPELKHLIIRQVPITDQALVHLKEIPKLKVLWLSSTRVSDAGLKQLQNLKALSTLNL
SNSQITDAGLKHLEAMNHLKFLEVKNTQVTPQAARELQKKIPGCRIRFDSPVAPTDLKLT
EETKKLQGKVIYRDSGQHRIIIQVTLKGEQVNDSLLKHLKGKSTLRVLNLDSTSISDQGL
ENLKDLTGLYTLKLTQSDISDKGLAHLSGLHNLRFLSLRDTAISDAGLPHLYSLKKLASL
DLNQTRVTANGIKQLQTKLPQCKIQSDHNRYQFPGGQALATLKSLGAYAVFTNRLPDGQP
LPYSECHLTLQGGRIGNEHLKLLKEIPHLKSLQITQTGITDIALSQLSDLSELEKLSISE
CDISGLGLARLQGLKNLNTLHFRLISLKNGGLDFLKQFPQLKSLEVLDCGLTDAELSQLK
SLPGLESLGLRDLGIKGAGLRELKHLKSLKSLNLHFTLFKDTGLDVLRECTQLKSLTLRD
CRFRSEELSHLSGLKHLETLILEDTKAEDKDLAVIAELDQLQKLNLARTQLTDAGLVHLA
NLDRLETLDLSGTKITSQGMTHLKKLKLLKTLDLKDTQVDDAALEWICSNPDLYSLNLWN
TPVTDRLFQVLEEQHIQLRKLELISTRVTPAGVEQFKKQNPRCAIRAIPALSKATEIGMQ
KLKESGAYASKMDVNDTFSVAVHLSKIVNHRSPAAPLHLQFELLKDVTPLSHLIVTSDQL
TDREIRQLPQFTDLQSLSLIGSELSDSALKQISQLKHLKILKLSNSKLTDQKLIHLKNMT
NLEFLELSQNQITGDGLKHLAGLTELQELDLSNNRISSEGIHHLQSLHKLTDLDLNGTRV
TDQGIEKLADLKALTTLNLRKTRMTDAGVSYIRKMTQLTHLNLEDTDVTDRGLIELISLQ
KLRILNLKETRVSAAAISKFQQQHPQCHLVYQISLPKSFAELLIKLRRAQISARKKQLGS
QNIIYSVSIPDADRLILKYDPLDQLLAILKEFKYIESLDILYKKLTDSNLKYLENLTSLK
TLKLDCPQITSQGLESLQGLHNLYSLTLKSPGINDAGLGHLQKMQYLSHLDLTGTRVGGD
NLQTLPEFNRLSTLILKQTQVDDEGLQQVAKLTSLKELSLEETRITGTGLAHLKGLSELS
ILSLKQCPVTDASLSHLKDMKALTRIDLGNTSVSDKGLEHLKSLSGLKHLSLYNTRVTIA
AAKEIQEQLPDCRVFYIIPFSEQAQKQIKHFQELGMIVRPTLDGFEMKIGDIYVPPTRRQ
LSDSFPHVDLRLKELKTVPDLKALYLGDPEMTDKGLTVLKQLTQLQKLAVCSPLVSDDGL
KKLAQLKQLEVLNLSSSGISDAGLPQLTNLKNLKELSVRDTKITLEGLTHLKELEHLERV
SVPKQNFPQEKLYEFSKMFPGTEVSAY
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcactttatctcttatctccggcaccattctgttgtgtttgctgattccagct
cccagggcagctgcagccgagatcacccgtgaccaggcgattcaggcgattcaaagtctg
ggcgggaaaatcagttatgccagaactgatattgaaaataaaatcgtctctgtcgtattt
gcgagtcacagaattactgacgatcagctgaaaccactgaatcaactcaaggacctgaag
caactgacattttacaatgcgagaatttcaggattgggactgaaatcactgactcaactg
aaacagcttcagaacctggagttcatcaattgtcctctcaaagacagtgctttcgaacat
ctggaacagtttccggaattaaaacacctgattatccgccaagtcccaataacggaccag
gccctggtgcatttaaaagaaataccaaagctgaaggtgttatggttaagctctacccgc
gtttcggatgcaggtctcaaacaactgcagaatctcaaagcactgagtacactgaatctg
tccaactcacagattacagatgcaggattgaagcacctggaagcgatgaatcaccttaag
tttctggaagttaaaaatacgcaagtcaccccccaggcggctcgcgaattacagaaaaaa
atacctggctgcagaatcagatttgacagtcctgtggcccccaccgatttgaaactgaca
gaagagaccaaaaagctgcaagggaaagtaatttaccgggattcaggccaacacaggatc
atcatccaggtgactctcaaaggggaacaggttaacgattcgttgctgaagcatctgaaa
gggaaatcaacactgagggtcctcaacctggattcgaccagtatcagtgatcagggactg
gaaaacttaaaagacctgacaggactgtataccctgaaactgacacagagcgacatctct
gataaaggactcgcccatctctcgggtttgcataacctgcgtttcctcagtttacgggac
acagcaatcagtgatgcgggtctgccacatttatactctctgaaaaaactcgcctctctc
gatttgaaccagacccgggttacggcaaacggtatcaagcaactccaaacgaagctcccg
cagtgtaaaattcaatcggatcacaacaggtatcaatttccgggtggtcaagcactcgcg
actttaaaatctctcggagcctatgcggtttttacgaatcgactcccggatggtcagcca
ctgccatattcagagtgtcacctcaccttacagggcggccgcatagggaatgagcattta
aaattactcaaggagattccacatctgaaatctctgcagatcacgcaaacgggaataact
gatatcgctctgtcacagctctccgacttaagtgaactggaaaaactcagtatctctgag
tgcgacatttccggtttagggctggccagacttcagggactgaaaaacctgaatacactg
catttcaggcttatttcactcaaaaacgggggactggattttcttaaacagttcccgcaa
ctgaagtctttggaggtgttggattgtgggctgacggacgcagaactgagtcaacttaaa
tctcttccaggtctggaatcattaggactcagggatctcggaatcaagggggctggactt
cgtgaattgaaacatttgaaatctctgaagtcactcaatctacattttaccctgtttaag
gatacgggactggatgtattaagagaatgcactcaactgaaatcgctcacactcagagac
tgtcgtttccgcagtgaggaactttcgcatctatccggtttaaagcacctcgagacctta
atactggaagatacaaaagcagaagataaagatctggcagtgatcgccgagctggaccag
ctacagaaactgaatctggcccgtacacaactgacggatgcaggactggtacatttagca
aacttggaccggctggaaacattagatctgtccgggacgaagataaccagccagggaatg
acacatttaaaaaagctgaagctgctcaaaacactcgatctgaaagacacccaggtcgat
gatgcagcacttgaatggatctgctccaaccccgatttatattcattgaatctctggaat
actcccgtcacggatcgacttttccaggtcttggaagaacaacacattcaactgagaaaa
ctggaactcatcagtaccagagtgaccccggcgggggttgagcaattcaagaaacagaat
ccacgttgcgcaatccgggctatacctgccctgagtaaggccacagaaatcggcatgcaa
aaactaaaagagtcaggtgcttatgcttccaagatggatgtgaatgacactttctctgta
gctgtccatctctctaagatcgttaaccacagatctcctgcggctcccctgcacttacag
tttgaactcctgaaagatgttaccccactatctcatctgattgtgaccagcgaccagctg
acagacagggaaatcagacaactgccgcagtttacggatctgcaaagtctatctttgatc
ggttcggaactctcggactcagcgctcaaacagatctcacaattgaaacatctaaaaata
ctcaaactttccaattcaaagctcacggatcagaaactgattcatctgaaaaacatgacg
aatctggaatttctggagctttcccagaaccagattactggtgacggtctgaaacatctc
gcggggttgactgagctgcaagaactggatttgagtaacaatcgcatttccagcgaaggc
attcatcatctgcagtcactgcataaactcacggatcttgatcttaatggtacaagagtg
actgaccagggaatcgaaaaactggctgatctgaaagcactgactaccctgaatttacgg
aagaccagaatgactgatgccggtgtctcctacatcagaaaaatgacgcaactcactcat
ctgaatctggaagacaccgatgtgactgaccgagggttgatcgaacttatcagcctgcag
aagttacgtatcttgaatttgaaagaaaccagggtttccgccgctgcgattagtaaattt
caacagcaacatccgcaatgccacctcgtgtaccagatttccttgccaaaaagctttgca
gagcttctgatcaagttacgcagagcccagatttcagccagaaagaaacaattgggttca
cagaatattatttattctgtctccatccccgatgccgaccgactcattctcaaatatgac
ccactcgatcaactgctcgcgattctgaaggaattcaaatatattgaatcgcttgatatc
ctttacaaaaagctgacggactccaacctcaaatatcttgaaaacctgaccagcctcaaa
accctgaaactggattgcccacaaattaccagtcagggactggagtcactacaagggttg
cacaatctctattcactgaccctaaaatcaccgggtatcaacgatgcaggactcgggcat
cttcaaaagatgcagtacctctcacatctagacctcaccggtacacgggttgggggtgac
aacctgcagacactaccggaattcaatcgcctgagtaccctgattttgaagcagacccaa
gtcgatgatgaaggtttgcaacaggtagccaaactgacttcgctaaaagaattatcactc
gaagaaactcgaattaccggcacagggctggctcatctgaaaggtctttctgagctttcg
atattgtccttaaaacaatgtcccgtcaccgacgccagtctgtcacaccttaaagatatg
aaagccctcacgcgaatcgatctgggtaataccagcgtttcagacaaaggtttggaacat
ctcaaatcattgtctggcttaaagcatctgagcttgtacaacactagagtcaccatcgca
gccgcgaaagaaatccaggaacaactcccagactgtagagttttctatatcattcctttc
agcgagcaggcgcagaagcagattaaacatttccaggaattggggatgattgtgcgaccg
acactggatggatttgaaatgaaaatcggtgatatctacgttcctcccaccagaagacag
ctaagcgattcgtttcctcatgtagacctcagattaaaggaactcaagactgttcccgac
ctgaaagctttatatctgggggatccggaaatgacagataaaggacttacggttttaaag
cagttgactcagttgcagaagctggctgtttgcagtcccctggtttctgatgatggatta
aaaaaactggctcaattgaaacagttggaggttcttaatttatcgtcctccggtatctca
gatgcagggctccctcaacttacgaatttgaaaaatctgaaagaactttccgtaagagat
acaaagatcacattagaaggcttaacccacctcaaagaacttgaacatctggagcgggtc
tctgttccaaaacagaatttccctcaggaaaagctctatgagttttcaaagatgttccct
ggcacagaagtgtccgcctattaa
DBGET
integrated database retrieval system