Gossypium raimondii: 105762801
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Entry
105762801 CDS
T04129
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gra
Gossypium raimondii
Pathway
gra03020
RNA polymerase
gra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105762801
09124 Replication and repair
03420 Nucleotide excision repair
105762801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105762801
03400 DNA repair and recombination proteins [BR:
gra03400
]
105762801
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105762801
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105762801
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
105762801
NCBI-ProteinID:
XP_012436162
UniProt:
A0A0D2SZ13
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All DBs
Position
12:2693513..2695614
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AA seq
318 aa
AA seq
DB search
MEGISYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMISEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
TSKDLYSSDHTVVPVDFTDNAGYDSTEPRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDLMESLTLEEKLSFVESSPTKVFDIDPNTQQVVVVDPEAYTYD
DEVLKKAEAMGKPGLVEIYAKEDSFIFTVESTGAIKASQLVLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatatcgtaccagcgattccctaaggttaaaatcagagagctgaaggatgac
tacgctaaatttgagcttcgcgataccgatgcctccatggccaatgccctccgccgcgtc
atgatctccgaggtccccaccatcgctattgacctcgtcgaaatcgaagtcaactcctcc
gtccttaacgacgagttcattgcccatcgcctcggtctcatccctctcaccagcgaacgc
gccatgtctatgcgcttctcccgtgactgtgacgcttgcgacggtgacggtcagtgcgag
ttctgctccgttgagttccatcttcgcgccaaatgcatttccgatcaaaccctcgacgtt
accagcaaggatctctatagttcggaccatactgttgttcccgtcgatttcaccgataac
gctggctacgattccactgagcctagagggattattattgtgaagttacggcgagggcaa
gaactgaggctgagggcaattgctaggaaagggatagggaaagatcacgccaaatggtca
cctgctgcgacggtgacttttatgtatgaacctgagattcatatcaatgaagatttgatg
gaaagcttgacgcttgaagagaagctaagctttgttgagagcagtccaactaaagtcttt
gacattgacccaaatacccaacaggttgtggtggttgatccagaggcgtatacctatgac
gatgaggtgctaaagaaagctgaagctatgggcaagcccggtcttgtggagatatatgcc
aaagaagacagtttcatctttacagttgaatccactggtgcgatcaaagcttctcagttg
gttcttaatgctatagaaatcctgaaacagaagctggatgcagttcgcctgtctgaggat
actgtggaagctgatgatcagtttggtgaactaggtgcccatatgcgaggaggatga
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