Gossypium raimondii: 105763979
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Entry
105763979 CDS
T04129
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
gra
Gossypium raimondii
Pathway
gra04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105763979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105763979
Transcription factors [BR:
gra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
105763979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
105763979
NCBI-ProteinID:
XP_012437839
LinkDB
All DBs
Position
12:complement(38201455..38208249)
Genome browser
AA seq
764 aa
AA seq
DB search
MDTYSSGEELVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEYIGTKTAVQ
IRSHAQKFFSKLEKEALAKGVPIGQALDIEIPPPRPKRKPSNPYPRKTSAATTVQEGAKD
GKSEMPLSSLHCKQMLDLEKEPLPERPTGDEKATNLKENQDESCSEVFTLLHEQNCSSAS
SMNKNFIPMSAALKSSCTFREFVPLPKEVVNHEKHEFYVILELKEICEPYKFNVQQIFHD
NGTSKASNLEKSCTSYEKSAQGQRKDDLDGAFCADEMQAAQNYPRHVAVHVLDGSLRTCV
QNPSLGMSFQDSVFHPMGDVHGPNLFANPAASATTEHQNNAPKSTHQALPPFHIPFIHLR
PDQEEYRSFLHVSSTFSNLIVSTLLQNPAAHAAASFAATFWPYANVESSGDSPANELRGF
PSTQTNSAPSMAAIAAATVAAATAWWTAHGLLPVCAPLHTGFTCAPASTAAVPPMENGQT
PAANMEQKDKTDLALTTQDERLDPEYSEALQGQHSASKSPTSSSSDCEERVDAKANTEVK
ATDDEKAAEVIEPQDVDKMKNRKQVDRSSCGSNSSSEVETDMLEKLEKDKEDPKGADPNH
PQVECNRRSRSSSNLSDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDGKNKGQQKENVG
ADKQNPVEKDRETSTLDLNRKMLDSRSDSQEVEKNALSKDEKNNAEDGLLRIGLGHAKLK
ASRTGFKPYKRCSVEAKENRVMNTGSQGEERGPKRVRLEGEAST
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggacacatactcctctggtgaagaacttgtaattaagactaggaagccttatactatt
acgaaacaacgtgaaagatggaccgaggaagagcataataggttcctagaggccttgaag
ctctatggacgagcttggcaacgcattgaagaatatataggaacaaagacggctgtgcag
atcaggagtcatgctcaaaagttcttttcaaagttggagaaggaggcacttgctaaaggt
gtaccaataggtcaagctcttgacatagagattccacctccacgccctaaaagaaaacca
agcaatccttatcctcgaaaaaccagtgctgctactacagtacaagagggagctaaggat
ggaaaatctgaaatgccattatcttctttgcattgcaagcaaatgttggacttggagaaa
gaaccacttccagagagacctactggagatgaaaaggctacaaatctgaaagaaaatcaa
gacgagagttgctctgaggtttttacccttctccacgaacaaaactgctcctctgcgtct
tccatgaataagaattttataccaatgtcagcagcactcaaaagctcttgtacattcagg
gagtttgtacctttgccaaaagaggtagtaaatcatgaaaaacatgaattctatgttatt
cttgaacttaaagaaatttgtgaaccttataaatttaatgtccaacagatatttcatgat
aatggtacaagtaaggcttcaaacttggagaagtcttgcacttcatatgagaaatcagct
caaggccagagaaaagatgatttggatggtgctttttgtgcagatgagatgcaagctgct
caaaattatcctcggcatgttgctgtgcatgtcctagatggaagccttagaacatgtgtt
caaaatccttccctgggtatgtcatttcaagattctgtatttcaccctatgggcgatgtt
catggacctaatctgtttgcaaatccagctgcatcggcaactactgaacatcagaataat
gcaccaaaatctactcatcaggcattgccaccttttcatattccctttatacatcttcgg
cccgatcaagaggagtatcgatcatttctacatgtctcctccactttttccaatctcatt
gtatctactttgttacagaatccagctgctcatgctgcagcaagttttgcagctacattt
tggccatatgcaaatgttgaaagttctggcgattctcccgcaaatgaactaagaggtttc
ccatctacacaaacgaactctgctcctagtatggccgcaattgctgctgcaacagtagca
gctgccactgcatggtggaccgcccatggactgcttcctgtatgtgctcctctgcacaca
ggctttacctgtgctcctgcatccactgctgcagttccaccaatggagaatggtcaaact
ccagctgcaaatatggaacaaaaagataaaactgatctagccctaactactcaggatgag
cgactagaccccgaatactctgaagctttgcaaggtcagcattcagcatctaaatcacct
acttcatcatcatcagactgtgaagagagagtagatgcgaaagcgaatactgaagtgaaa
gctactgatgatgagaaggctgctgaagtgatcgagcctcaggatgtagataaaatgaag
aacagaaaacaagttgaccggtcctcatgtggttccaattcaagtagtgaggtagagaca
gacatgttagaaaaacttgaaaaagacaaggaagatccaaaaggagctgatccaaatcat
ccacaagttgaatgtaaccgtcgtagtagaagcagcagtaaccttagtgattcttggaag
gaggtatctgaagagggacgactggcttttcaagccctcttctccagagaggtacttcca
caaagcttctctcctccacatgatggaaagaacaaggggcagcaaaaggaaaatgtaggt
gcagacaagcaaaatccagtcgagaaagacagagagacatcaacattagaccttaataga
aagatgttagattctcgttccgacagtcaagaagtagagaaaaatgcattatcaaaagat
gagaagaacaatgcagaagacggcctgctgaggattggactaggacatgcaaaacttaag
gccagccgaactggatttaaaccttacaaaaggtgttctgtggaagccaaggaaaataga
gtgatgaacaccggcagtcaaggtgaagagagaggtcccaagagggtacgcttagaaggg
gaagcttcgacttga
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