Gossypium raimondii: 105772196
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Entry
105772196 CDS
T04129
Name
(RefSeq) ABC transporter B family member 13 isoform X2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105772196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105772196
04147 Exosome [BR:
gra04147
]
105772196
04090 CD molecules [BR:
gra04090
]
105772196
Enzymes [BR:
gra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105772196
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105772196
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105772196
CD molecules [BR:
gra04090
]
Proteins
105772196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_16
Zeta_toxin
ABC_ATPase
DUF87
RsgA_GTPase
AAA_21
AAA_30
nSTAND1
AAA_23
P-loop_TraG
DEAD
Motif
Other DBs
NCBI-GeneID:
105772196
NCBI-ProteinID:
XP_012448976
UniProt:
A0A0D2QZN6
LinkDB
All DBs
Position
6:complement(108260..113288)
Genome browser
AA seq
1242 aa
AA seq
DB search
MEEIELSHHQESVPKPEQSSDLTRRKPVSFLRLFSAADKLDCALMVFGSLGACIHGAALP
VFFVMFGRMIDSLGHLSSDPHKLSAQVSEHAIYLVYLGLVVFASAWIGVAFWMQTGERQT
ARLRLKYLQSVLRKDISFFDTEARASNIIFHISSDAILVQDAIGDKTGHAFRYLSQFIVG
FAIGFTSVWQLTLLTLAVVPLIAIAGGAYTIIMSTLSEKGEAAYSEAGKIAEEVISQIRT
VYAFVGEERAVKAYSSSLKNALKMGKRSGLAKGVGVGFTYGLLFCAWAFLLWYAGILVRH
SKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIFSMIDTDSKPSGQTDGET
ILPEVVGKIEFREVCFAYPSRPGTVFEKLSFSIDAGKTFAVVGPSGSGKSTIISMVQRFY
DPTSGSILLDGYDLKNLQLKWLREQMGLVGQEPALFDTTIADNILLGKEDADMEQVILAA
KAANAHSFIEELPNSYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAE
SELIVQQALDKIVSSRSTIIVAHRLSTIRDVDTIIVLKNGQVVESGSHMDLMSKKGEYAA
LVSLQISENTEISSSICHSDVSESSSFRQPQDSQNLGQDSRPITAIELEQSCQNSSQQSS
ASNPSIWELLKLNAPEWPYALLGSVGAILAGMEAPLFAFGITHVLTAFYSPDDIQIKEEV
KRVALIFVGLAILTIPIYMLQHYFYTLMGENLTARVRLSMFSAILSNEVGWFDLDENNTG
SLTAALAADATLVRSALADRLSTIVQNVALTVTAFVIAFALSWRIASVIIASFPLLIGAS
ITEQLFLKGFGGNYSHTYSRATAVAREAIVNIRTVAAFGVEDRISIKFASELNQPKKQAC
LRGHISGFGYGVSQLFAFCSYALGLWYASVLIKQNKSNFGDVMKSFMVLIITALAVAETL
ALTPDLVKGSQALGSVFGILHRKTSIEPNDSTSNVVTEIKGDIEFRNVSFKYPMRPDVTI
FDKLNLKTSAGKSLAVVGQSGSGKSTVIALIMRFYDPVSGAVVIDGYNIKALNLRSLRLR
MSLVQQEPALFSTTIYENIKYGKEDASEIEIMKAARAAHAHRFISRMPEGYQTHVGNRGV
QLSGGQKQRVAIARAILRNPSILLLDEATSALDSESEKLVQEALDNLMEGRTTIIVAHRL
STIRNSDSIAVLEQGKVLEIGSHEQLTKKPGSVYKQLVSLQQ
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatagagctgagtcaccaccaggaatcggttccgaaaccggagcaatcgtcg
gatttgacaagaaggaaacctgtttcattcctccgtcttttttcagctgctgataaatta
gattgtgccttgatggtttttgggagtttaggggcgtgcatacatggggctgctcttcca
gtgttctttgttatgtttggtcgcatgatagattctttagggcatttgtcttcggatcct
cacaagctgtctgctcaggtttctgagcatgctatttacttggtctaccttggcctcgtc
gttttcgcatcggcatggataggtgttgcattctggatgcaaaccggggagagacagacg
gctcgtttgcgactgaaataccttcagtcggtcttaagaaaagatataagcttctttgac
actgaagctagagcttctaacataatttttcatatctcaagtgatgcaatccttgtccag
gatgccataggtgacaagacaggccatgctttccgttacctttctcaatttatcgttggt
ttcgccattgggtttacatctgtatggcagcttacactactcaccttagctgtagttcca
ctgatagccattgcaggcggagcttatactataattatgtcaactctatccgaaaaaggc
gaggctgcttattccgaagctgggaagattgccgaagaggttatttcgcagattcgtaca
gtatacgcatttgtaggagaggaaagagcagttaaagcatactctagttcacttaaaaat
gctcttaaaatggggaagagaagtggacttgcaaagggggtaggtgttggatttacatat
ggtctgctgttctgtgcatgggcctttcttctttggtatgccggcatactcgtcagacac
agtaaaacaaacggagggaaagcgtttacaacgattatcaatgtcattttcagtggattt
gctttaggccaagcagcaccaaaccttgctgccattgctaaaggccgggcagctgctgcc
aatatcttcagcatgatagatactgactcaaagccttcaggacagacagatggtgaaact
attttgccagaagtagttggaaaaatcgagttccgtgaggtctgttttgcttatccgtct
cggcctggcacggtgtttgagaaattaagtttctcaatagatgctgggaagacgtttgca
gttgttggtcctagtggttcaggaaagagtaccatcatttccatggttcaacgtttctat
gatcccacttcaggttctatattattggatggatatgatcttaagaatctgcagctaaaa
tggttgagagaacaaatgggattggtcggtcaagaaccagcactgttcgacacgacaata
gccgataacatcctacttggtaaagaagatgcagatatggagcaagttatattagctgcc
aaagctgctaatgcacattctttcattgaagaactacctaatagttataatacacaggtt
ggagaaggaggaactcagctttctggaggtcaaaaacaaagaattgctatagcaagagca
gtgctgaggaaccccaagatactgcttcttgacgaggctacaagtgctcttgatgcagaa
tctgaactcatagttcaacaggcactagataagatagtgtcaagtcgatcaacgatcatc
gtggcgcatcgattatccactattcgagatgttgacactatcatcgttttgaagaatgga
caggttgttgagagtgggagccacatggatttgatgtctaagaaaggagaatatgcggct
ttggttagcttgcaaatatcagaaaacactgaaatttcgagctctatatgtcattccgat
gtttccgaaagttctagctttcgacaacctcaagacagtcaaaatctggggcaggattcg
agaccaattacagcaatagaattggagcaaagttgtcaaaactcatctcagcaaagttct
gcttctaatccatcaatatgggaactacttaaattaaatgcaccggaatggccatatgcg
ctacttggctcggttggtgcaattctggccggcatggaagctccgctatttgccttcgga
atcacgcatgtcttgactgcattttactctcctgatgatattcaaatcaaggaagaggtt
aaaagagtggctcttatatttgttggtctggctattcttaccattcctatatatatgttg
caacactacttctataccttaatgggggagaaccttacggctcgtgtccgtttatcgatg
ttctcagctatcctttccaatgaggttggttggtttgatttggatgagaacaatactggc
tcattgacagcagctttagctgcagatgcaaccctcgtgcgaagtgctttagctgatcgg
ctatccacaatcgtgcagaacgtagcacttaccgtgacagcatttgtaatagcatttgct
ttaagttggcgtatcgcatctgttatcattgcctcctttcctttactcataggtgcatcc
ataactgagcaactgtttcttaaggggttcggagggaattacagccatacgtactctaga
gcaactgctgtggcacgtgaagcaattgttaacattcgtactgtggctgcatttggtgtt
gaagaccggatttcgatcaagtttgcctctgaattaaaccaaccgaaaaagcaagcatgc
ttacgaggtcatatatcgggttttggatacggcgtatcacagctctttgcattctgttcc
tacgcacttggcctttggtatgcatcggtgctaatcaagcaaaacaaatctaacttcgga
gatgtcatgaagtccttcatggttttgataatcacagcactggcagtagcagaaacacta
gctctcacaccagatctcgttaaagggtcgcaagcactcgggtccgttttcggtattctt
cataggaaaacatcaatagagccaaatgattccacatcaaacgtagtaaccgagatcaaa
ggtgacatagagttcagaaatgttagtttcaagtacccaatgagacctgatgtaaccatt
tttgacaagttaaacctgaaaacttcagctggaaaaagtctagccgtagttggacaaagc
gggtcagggaaaagcacagtgattgcattaattatgcggttttacgaccccgtttccggg
gcagttgtgatcgatggctacaatattaaggcactaaacttaaggtctctaaggttaaga
atgagtttagtccagcaagagcctgcactgttctcaaccacaatatacgaaaacatcaag
tatggcaaagaggatgcatcagagattgagataatgaaagcagcaagagcagctcatgct
catcgattcattagccgaatgcctgaagggtaccaaacccacgtcggcaatcgaggtgtc
cagttatcgggtggccaaaagcagagagtggcaattgctagagcaatactaaggaaccct
tccattcttctcctagatgaagccacaagtgcattggactcggaatctgagaaactagtt
caagaagctctggataatctcatggaaggtcgtaccacaatcatcgtagcgcatcggtta
tcgactatacgtaattcggacagcattgcggtgttggaacaagggaaggtacttgaaatt
ggcagccatgaacaactgacgaagaaaccaggcagtgtttataaacagttggtcagttta
caacagtaa
DBGET
integrated database retrieval system
