Gossypium raimondii: 105779718
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Entry
105779718 CDS
T04129
Name
(RefSeq) ABC transporter B family member 20 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105779718
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105779718
04147 Exosome [BR:
gra04147
]
105779718
04090 CD molecules [BR:
gra04090
]
105779718
Enzymes [BR:
gra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105779718
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105779718
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105779718
CD molecules [BR:
gra04090
]
Proteins
105779718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_21
Zeta_toxin
HTH_psq
Motif
Other DBs
NCBI-GeneID:
105779718
NCBI-ProteinID:
XP_012459065
UniProt:
A0A0D2V2S8
LinkDB
All DBs
Position
4:complement(40444827..40453140)
Genome browser
AA seq
1407 aa
AA seq
DB search
MMVSRGFFGWSPPHIQPLTPVSEVSEPPESPSPYLDTTAEASGEAAQVEADEEMEEEEEI
EPPPAAVPFSGLFACADRLDWVLMIVGSLAAAAHGTALVVYLHCFAKIIQVLGLGPPEQG
QDRMDEQFERFKELSLTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDM
SFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGFVNCWQIALITL
ATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYAT
SLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTNHKAHGGEIIAALFAVI
LSGLGLNQAATNFYSFDQGRIAAFRLFEMISRSSSGLNQEGNILASIQGNIEFRNVYFSY
LSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNL
KLEWLRSQIGLVTQEPALLSLSIKDNIAYGRDATFDQIEEAAKIARAHTFISSLERGYET
QVGRAGLALTEEQKIKLSIARAVLLNPTVLLLDEVTGGLDFEAERTVQEALDLLMLGRST
IIIARQLCLIRNVDYIAVMEDGQLVEMGTHDELLALDGLYAELLRCEEAAKLPRRMPVRN
YKETSTFQIEKDSSSVHSFQESSSPKFVKSPSLQRVHGIFRPQDGAFNSQESPKAHSPPP
EKMLENGLSVDAGDKEPSIRRQDSFERRLPELPKLDVQSAQQQKSNDSDPESPVSPLLTS
DPKNERSHSQTFSRPLSYSDDIPMEVKEAKDVHHGEAPSFWRLAQLSFAEWLYAVLGSIG
AAIFGSFNPLLAYAIALIVTAYYRRQEHHHLQDEVDRWCLIIACMGIVTVVANFLQHFYF
GIMGEKMTERVRRMMFSAMLRNEIGWFDNEENSPDNLSMRLANDATFVRAAFSNRLSIFI
QDSAAVIVAILIGMLLHWRLALVAFATLPVLAVSAFAQKLWLAGFSKGIQEMHRKASLVL
EDAVRNIYTVVAFCAGNKVMDLYRLQLKKILKQSFFHGMAIGFAFGFSQFLLFACNALLL
WYTALSVKRSYIDLPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLASVFEIIDRVPK
IEPDENSALKPPNVYGSIELKNVDFCYPTRPEMLVLSNFSLKVNGGQTVAIVGVSRSGKS
TIISLIERFYDPVAGQILLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHN
ASESEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLL
DEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMKHVDNIVVLNGGRIVEEGTHD
SLLAKNGLYVRLTQPHFGKGLRQHRLV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatcaagaggtttttttgggtggtcaccaccccacatacaacctttgacacca
gtctcggaggtttcggagccgccggaatctccgtctccgtacttggatacaacagcggaa
gcttctggtgaagcggcacaggtggaggcggatgaagagatggaagaggaagaagagatc
gaaccgccccctgccgctgtgcccttctctggattgtttgcctgtgctgacaggcttgat
tgggttctcatgatcgttggatcccttgctgctgcagctcatgggactgcacttgttgtt
tacttacattgttttgcgaagatcattcaggttcttggacttgggccaccagaacagggg
caagacagaatggatgagcagtttgagaggttcaaagagctttctttaactattgtttat
attgctgcgggtgttttcgctgctggctggatagaggtttcatgctggattctgacggga
gagcgacagactgctgttattaggtcaagatatgttcaagtattattgaaccaagatatg
agcttttttgatacttatgggaataatggagacatagtgagtcaagtattgagtgatgtg
ctgctcatccagtctgctcttagtgaaaaagttgggaattacattcataacatggctaca
tttttcggtggtctaattattggttttgtcaattgttggcaaattgcgctcataactctg
gctactggtccgttcattgttgctgctggaggcatatccaatatatttcttcacaggctt
gctgagaatattcaagatgcttatgctgaggcagctagcattgctgaacaggcagtctct
tatgtcaggaccttgtatgcatttacaaatgaaactttagccaaatattcatatgcaacc
tcattacaagccactttgagatatggtatattgattagtcttgtgcaagggcttgggctt
ggatttacatatgggcttgcgatatgttcttgtgccttacaactttgggttggaaggttc
cttgtcacaaatcacaaagctcatggtggtgaaatcatagcagctctttttgctgtaatt
ttaagtggccttgggctgaaccaagctgcaacaaatttctattcctttgaccaaggtcga
attgctgcttttagactttttgagatgattagccgttcatcctctggtttgaaccaggag
ggaaacatcctagcttccattcaaggaaatattgaatttaggaatgtgtattttagttat
ctatctcgacctgaaattcctatactgagtggcttttatctcactgtacctgctaaaaag
gctgtggcacttgttggtagaaatggctctgggaaaagcagtattatcccactcatggaa
cggttttatgatcctaccttaggggaagttcttctagatggtgagaatattaaaaaccta
aagctggaatggctgagaagccaaataggactcgttactcaggaacctgccttgcttagt
ttgagcataaaagataatattgcttatgggcgagatgctacatttgatcagattgaagaa
gctgcaaaaatagcaagggcacatacattcattagttcacttgagagagggtacgagaca
caggtggggagggctggcttagcattaacggaagaacagaaaatcaaactttctattgct
agagcggtgcttttgaacccaacagtccttctgcttgatgaagttactggtggacttgat
tttgaagctgaaagaactgttcaggaagctctagatctcctcatgttgggacgttcaact
ataataatagctcggcagctttgtctcataagaaatgttgattatatagctgtgatggag
gacggtcagctggttgaaatgggtacacatgatgagttactagcccttgatgggttgtat
gctgagctcctcagatgtgaggaggctgcaaaacttccaaggaggatgccagttaggaat
tacaaggagacgtcaacattccaaattgaaaaggattcttcatcagttcacagcttccaa
gaatcttcatctccaaagtttgtcaaatcaccttctctccaaagagttcatggtatattt
cggccccaagatggtgcttttaactcacaagaatcacctaaagctcatagtccaccacca
gagaagatgctggaaaatggcttatcagtggatgctggtgataaggaaccatcaattagg
aggcaggatagttttgaaaggagacttccagagttgcctaaacttgatgttcagtctgcc
cagcagcagaaatcaaatgattcggacccagaatctcctgtatcaccccttctgacatct
gatcctaagaatgaacgttcgcattctcagacttttagtcggcctctcagttactctgat
gatatcccaatggaagttaaggaagcaaaggatgtgcatcatggggaagctccgtcattt
tggaggttggcacagcttagttttgcggagtggctctatgctgtcttgggaagcattggt
gcagcaatctttggctctttcaatccacttcttgcatatgctattgcactgatagtaacg
gcatattataggcgtcaggaacatcatcatttacaagatgaagtagacaggtggtgtttg
ataattgcctgtatgggtatagtgactgttgttgccaacttcttgcaacacttctacttt
ggcattatgggggagaaaatgactgaacgggtgcgcagaatgatgttctcagcaatgctg
cggaacgaaattggatggtttgataacgaagagaatagccctgataacttgtccatgcga
ttggcaaatgatgctacatttgtaagggctgcttttagcaatcggctttcaatatttata
caggatagtgctgctgttattgttgctatactaattgggatgttgctacattggcggttg
gcacttgtggcatttgcaacccttccagtcttagctgtctctgcttttgcacagaaatta
tggctcgctggattttcaaagggaatccaggagatgcataggaaggcatcattggtcctc
gaggatgcagtgaggaacatttacactgttgtagcattttgtgctggtaataaggtaatg
gacctctacaggctacagttgaagaaaatattgaaacagagtttctttcatggaatggca
atagggtttgcatttggcttttcacagtttcttctttttgcctgcaatgctctgctcctt
tggtacaccgcactctctgttaaaagaagctatatagatctgcctacagcgcttaaggag
tacatggttttctcttttgcaacttttgcactggtggagccatttggattggcaccatac
atacttaaaaggcggaaatctctcgcttcagtgtttgaaattattgaccgagtccctaaa
attgagccagatgaaaactcagcattgaagccaccgaacgtctatggaagcattgagctg
aaaaatgttgatttctgctatcccactcgtccggaaatgttggtattgagcaatttcagt
cttaaagttaatgggggacaaactgtagccattgttggagtttcaagatctgggaagagt
accataatatctctaatagagaggttttatgatccagttgcaggtcagattctacttgat
ggacgggatttgaagctctacaatttgaggtggttgaggaaccacttaggtcttgttcaa
caggagccaattattttctcgactacaatccgggaaaacattatatatgcaaggcacaat
gctagcgaatccgagatgaaagaggctgcaagaatagctaatgctcaccattttatcagc
agcttgcctcatggttacgatacacatgtgggtatgaggggtgtggatttgactccagga
cagaaacaaagaattgctattgctcgagtggtgctgaagaatgctcccatcttattattg
gatgaagctagctcgtccatcgaatctgagtcaagccgagtggtgcaggaggcacttgac
acattgataatgggaaacaaaacaaccattttgatagcccatagagctgcaatgatgaag
catgttgacaacattgtagtacttaacggtggtcgaattgttgaggaagggacacatgat
tctttgttagcaaaaaatggcttgtatgttcgtttaacgcaacctcatttcgggaaaggt
ttgcgtcagcatcggttggtttag
DBGET
integrated database retrieval system
