Gossypium raimondii: 105781849
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Entry
105781849 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105781849 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105781849
03015 mRNA surveillance pathway
105781849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105781849
03041 Spliceosome [BR:
gra03041
]
105781849
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105781849
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
105781849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Cornifin
Motif
Other DBs
NCBI-GeneID:
105781849
NCBI-ProteinID:
XP_012461820
UniProt:
A0A0D2VKH1
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Position
13:complement(58124604..58129296)
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AA seq
862 aa
AA seq
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MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVIRPWIATRVTELL
GFEDEVLINFIYGLLDGKEVNGKQVQISLTGFMEKNTGKFMKELWSLLLSAQRNASGVPQ
QFLDAKEEETRKKKAESDRIANEIQKKKDKESRENEQNRLGKMDDGDEIKAGDTELDPSS
KNMLPTKGSRARPEDERDADQRNGVGRNRSRSQSVSRSFSNSRSYSDGKQKFRSVSRSPE
SRRCSVSSDRMHPSPRRRSSTPRSRHSPSFSRSPVRRRPSYYRRRSPERRRPSYSRRRSQ
SRSPYRRGSPTPVRRRSRSPYRRRSPTPVHRRSRSPIRRYRSPSPITRRRSPLSIRRRRS
PSLVRRRRSPSPMLHGSRSPVRRRSPSPIRRKSPLPVRRRSPSPLRRRSPPPMRRRSPSP
VQQRHRRSSSPRRRRSPPSSRRSVTPSRGKSPSPYQSSSMSPVQRRSSSPVRRSPKGQRS
PSLSQGGQRMRRNLSPVGHNHSSMRSTRIDRMDQSDTDDKVPGLSPPLNKSPLSKSPSHV
RHRSGSEDRRLSSPYGSPPRQRKARIARDDSFSPEQKPRELKGHRDGQGTGRRNETSESR
HSPPISRQRVSPRKVHTPERLAGSRSIDSRSRLDNVESRKKDLETKSKRSSGEGVHSGTD
RQRSPAISEDSFQGEKQSRSRLREGKRSDERSCSHKNTKDSDEHHKVETSPVLLEKVDYS
NRGSDSDSKGSDKRRTKHKDGKRKHKRSERRKVTSDDDDSSYDSEIDDRKEAKRRKKEEK
RLRKEEKRKRSEERRRKREARRAEKLKTKRHDDDSSSDGEHAGTGKSRPGDDEEAETEQK
KLEIELRKKALESLKAKKGISH
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggatttttccggggtacttcggccgatcaagatactcggttctctaataag
caggcgaagctactgaaatcgcagaaatttgctcccgaattggagcatctggttgatatg
acaaaggttaagatggatgttattagaccttggattgctactagggtaactgagcttctt
ggttttgaagatgaagttcttattaacttcatttacggtcttcttgatgggaaggaagtt
aatggcaagcaagttcagatatccctcactggattcatggagaagaatactgggaagttt
atgaaagagctttggtctcttctacttagtgcacaaaggaatgcaagtggtgttccccaa
cagttcttggatgccaaagaagaagaaactaggaagaaaaaggcagagtcggatcggatt
gcgaacgagattcagaagaaaaaagacaaggaaagtagagaaaatgaacaaaatagattg
gggaaaatggacgatggggatgaaatcaaggctggtgatacagagttggatccgtcctca
aagaatatgctgccaacaaagggttcacgtgcacgccccgaggatgagagagatgctgac
caaaggaatggtgttggaaggaatagatcgcgttctcaatcagtcagcagatcgttttct
aattcgagaagctattcagatggcaaacagaagtttaggagtgtatctagatcacctgaa
tcacggcgatgctccgtttcctctgataggatgcatccatctcctagaaggcgatcttca
actcctcgatccaggcattcaccttccttctcacgctctcctgtaagacgaagaccatct
tattacaggcgaaggtctcctgaaagacgaagaccatcttactctaggcgtagatctcag
tctcgttctccttatcggcgcgggtcacctacacctgtgcgccgtagatctcgttctcct
tatcggcgcaggtcacctacacctgtgcaccgtagatctcgttcacccatccgacgttat
agatcaccatcacctattacacgtcgtagatcaccattgtccattcgacgtcgcagatca
ccatctcttgtacggcgtcgtaggtctccctcacctatgctccatggatctcgttcccct
gtgcgtcgcagatctccttcacctatacgtcgtaaatccccattgcctgtgcgccgtagg
tctccatcacctctacgacgaagatcaccacctcccatgcgacgtagatcaccttctcct
gtgcaacagcgacaccgcagatcttcatccccacggcgacgtagatcacccccttccagc
cgtaggtcagtaactccttcccgtggtaagtctccgtcaccttatcaatcaagttctatg
tctcctgtgcaacgtagatcttcttcaccagttaggaggtctccaaagggacaaagatca
ccttctctttctcaaggaggacagcgaatgcgtcggaatttgtctcctgtgggacataac
cactctagtatgaggtccacacgtatagatcgtatggatcagagtgatacagatgataaa
gtgcctggtttatcaccacccctgaataagtctcctctctccaaatccccatcacatgtg
aggcaccgatctggaagtgaagataggaggttgtcaagtccatatggaagtcccccgagg
cagaggaaggcccgaattgctcgtgatgatagctttagtcctgaacagaaaccaagagaa
ctgaaaggtcatcgggacggtcaaggaacggggagaagaaatgaaaccagtgaaagcagg
cattcaccgccgatcagtaggcaaagggtttctcctaggaaggttcatactcctgaacga
ttggcaggcagtcggtctatagactctcggagtcggcttgataacgttgaatcgagaaag
aaagaccttgaaacaaagagcaaaaggtcttccggagaaggtgttcattcaggaactgat
cgacagcgatcaccagcaatatcggaggactcgtttcaaggtgagaagcaaagtagatca
cgcttgagagaaggaaaaagatctgatgaaagaagttgttcccataaaaacacaaaggac
agtgatgaacaccacaaagtagaaacttcacctgtgttgcttgaaaaggttgattatagt
aaccgtggttctgattcagattccaagggaagtgataagcgcagaactaagcacaaggat
ggtaagagaaagcataaacggtccgagaggcgtaaagtcacttcagacgacgatgattct
agttacgattccgaaatcgatgacaggaaagaagctaagaggaggaaaaaggaagaaaag
agattaagaaaggaagaaaaacgtaaacgtagcgaggaacggcgtcgcaaaagagaagca
cggcgtgcagagaagctcaaaacaaaacgtcacgacgatgattctagttcagatggagag
catgcaggaactggaaagtctcgtccaggtgatgacgaggaggcagaaactgaacagaag
aagcttgagatcgagttgaggaagaaggctcttgaatcgctcaaagcaaagaagggtatc
agtcactga
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