Gossypium raimondii: 105781888
Help
Entry
105781888 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105781888 isoform X1
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105781888
Enzymes [BR:
gra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
105781888
Ribosome biogenesis [BR:
gra03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
105781888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
FtsJ
Met_10
Methyltransf_25
Methyltransf_31
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
105781888
NCBI-ProteinID:
XP_012461873
UniProt:
A0A0D2M8X6
LinkDB
All DBs
Position
1:complement(10793959..10799200)
Genome browser
AA seq
526 aa
AA seq
DB search
MAHLLPLRVFLSSQTQETPSKPLKLSKRSNNHKTSISTAKKGLLSPSHKMHKLNLEVSPH
RAVSAVRLMRIEFGGAFADLLNEKGKGSGDNEMGYVERTLGFRTRDLDDRDLRLVTDIVG
GTIRWRRYLDHLIGSLCHDESMFRSMEPLLLQILRIGFYEIVKLNMPPYAVVDENVKLAK
VALRPGAGNMVNGILRKLVLVKENNSLPLPKLEGDSRAQARALATLYSHPVWMVRRWTKY
LGQEEAIQLMMWNNSDPSFSLRANAAKGITRDDLVMQLNSLKVPHEVSLHLDDFVRVKIG
LQNVIRAGLLKEGLCSVQDESAGLAVSVVDPQPGEDIIDCCAAPGGKTLYMASRLRGKGK
VHAIDINKGRLRILKETAKLQKVDGVVDTIHADLRTFAESSPMKSGKVLLDAPCSGLGVL
SKRSDLRWNRRLEDMEQLKNLQDELLDAASTLVSSGGVLIYSTCSIDPEENKDRVEAFLV
RHPEFRIDPVNRYVPSDFVTKQGFYFSDPVKHSLDGAFAARLVRTL
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggcacacctgctgccacttcgcgtattcctttcttcacagacacaggaaactccctcc
aagccattgaaactttccaagagaagtaacaatcataaaacatccatttcaactgctaaa
aaaggtcttctcagtccctcgcacaaaatgcacaagttgaatttggaggtttctccccat
agagctgtatctgctgtgagattgatgagaattgagtttggtggtgcatttgctgacctt
ttaaatgagaaaggaaagggttctggagataatgagatgggatatgtggaaagaactctt
ggtttccgtacccgtgatttagatgatcgagatcttagattggttacagatatcgttggt
ggtaccattcgctggaggagatatcttgaccatttaattggatccctatgtcatgatgaa
agtatgtttagaagcatggaaccacttctgttacagattctccgaatcggtttctatgag
attgtcaagcttaatatgccaccatatgctgttgtagatgagaatgtaaaacttgcaaag
gttgctcttcgacctggtgctggtaacatggtcaatgggattctccggaagttagttttg
gttaaggaaaataactcccttcctctacccaaattggaaggtgatagtcgtgcacaagca
cgtgctcttgctactctatattctcatcctgtttggatggtaagacgatggacaaagtat
cttggacaagaagaggcaattcagctaatgatgtggaacaatagtgatcccagttttagc
ttaagggcaaatgctgcaaagggaattactagagatgatctagtgatgcagcttaattcc
ttgaaggtcccgcatgaggtttctttgcatttggatgattttgtccgtgtaaaaattggt
ttgcagaatgtcatacgagcagggttgctgaaagaaggtctctgttctgtccaggatgaa
agtgcaggtcttgcagtttctgttgtagatcctcaacctggcgaggacattatcgactgt
tgtgctgctcctggaggaaagactctttacatggcatctcgtttgaggggcaaaggcaaa
gtgcatgcaattgacataaacaaaggccgtttgagaattcttaaagagacagccaagttg
caaaaagttgatggtgttgttgacacaatccatgccgatcttcgtacttttgctgaaagt
agtccaatgaaatctggtaaagttttgttggatgccccttgttctggactcggtgttctc
tccaagagatcagatttgcgttggaatagaagattagaagatatggaacaacttaagaat
ctgcaggatgaactccttgatgcagcatccacattggtgagctcaggaggggtattaata
tacagtacttgctccattgaccctgaagagaacaaagacagggtggaagcttttcttgtc
aggcatcctgaattcagaatagatcctgtgaatagatatgtgccatctgattttgttaca
aaacaaggcttctatttctctgatcctgtaaagcattccctagatggagcctttgcagct
cgtcttgttcggactttgtga
DBGET
integrated database retrieval system