Gossypium raimondii: 105784231
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Entry
105784231 CDS
T04129
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gra
Gossypium raimondii
Pathway
gra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105784231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105784231
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105784231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
105784231
NCBI-ProteinID:
XP_012465504
LinkDB
All DBs
Position
1:15696052..15703304
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AA seq
789 aa
AA seq
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MLNGTEDEEKWLAEGIAGIQHNAFYMHRALDSNNLREALKYSAQMLSELRTSKLSPHKYY
ELYMRAFDELKRLELFFKDDSKHGVSVVDLYELVQHAGNILPRLYLLCTVGSIYIKSKEA
PAKEVLKDLVEMCRGVQHPIRGLFLRSYLAQISRDKLPDIGSEYEGDADTVMDAVDFVLQ
NFTEMNKLWVRMQHQGPGGVREKREKERSELQDLVGKNLHVLSQIEGVDLEMYKETVLPR
VLEQVVNCKDDLAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDVKTVLSRLMDR
LSNYAASSADVLPEFLQVEAFSKLSNAIGKVIEAQLDMPAVGAITLYVSLLTFTLRVHPD
RLDHVDQVLGACVKKLSNIPKLEDSRAMKQVVALLSAPLEKYNDIVTALTLSNYPRVMDH
LDIGTNKLMAMVIIQSIMKNNSCISTADKVEVLFELIKGLIKDIDGADVDELDEEDFKEE
QNSVARLIHMLYNDEPEEMLKIICIVRKHTMVGGPKRLPFTVSSLVFSALRLLRQLQGQE
GDIVGEEASMTPNKNFQLLTQIIESLSAVPSPELALRLYLQCAEAANGCDIEHVAYEFFT
QAFVLYEEEIADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSARLLKKADQCR
AVYACSHLFWVDDQDGIKDGERVLLCLKRALRIANAAQQMANVARGSGGPVSLFVEILNK
YIYFFEKGNKQITSSAIQGLIELINTEMQSDSTNPDSVADAFLASTLRYIQFQKQKGGVM
GEKFESIKL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacggaacagaggacgaagagaaatggctggcggaagggatcgctggtattcaa
cacaatgctttttatatgcatcgagctttggattctaataatcttagagaagctctcaag
tactctgctcaaatgctatcggagctccggacctccaaactctctcctcacaaatactat
gaactttatatgcgagcttttgatgaattgaagagattggagttattcttcaaagacgac
agcaaacatggtgtctctgtggttgatctgtacgagcttgttcaacatgccggcaatatt
ttgcctagattgtatcttctatgtacagtaggatctatctatatcaaatctaaggaggct
cctgctaaggaagttcttaaagaccttgtggaaatgtgtcgtggagttcaacatcccata
cgtggactctttttaaggagttaccttgctcaaataagccgagataagttaccagatatt
ggttccgagtatgagggtgatgctgacactgtgatggatgctgtggactttgtgctacag
aatttcaccgagatgaataaactttgggtgcgaatgcagcatcagggacctggtggagtt
agagagaagcgagaaaaggaaaggagcgaacttcaagatcttgtagggaaaaacctacat
gttctgagtcagatagaaggtgtggaccttgagatgtacaaagaaacagttcttcccaga
gtcttggagcaggttgtcaattgcaaagatgatcttgcccaatattatctaatggattgc
attattcaggtattccctgatgagtatcacttgcagacgctcgagacattgttgggtgct
tgtccccagctccagccaacagtcgacgtcaagacagttttgtctcgactaatggataga
ctttcaaattatgctgcttcaagtgcagatgtattacctgaatttctacaagtagaagcc
ttctctaaattgagcaatgcgattgggaaggtcatagaagcacagttagacatgcctgct
gttggagctataactttatatgtctctcttcttacctttactcttcgtgtccatcctgat
cgtcttgatcatgtggatcaagtactgggagcttgtgttaagaagctctctaacatacca
aaacttgaagatagccgggcaatgaaacaagtggttgcacttttgagtgctccattggag
aaatataatgatattgtaacagccttgactctttctaattatccacgtgtaatggaccat
cttgatattggaacaaataaacttatggcaatggttatcattcaaagcattatgaagaac
aactcttgcatttcaactgcagacaaggttgaggttttgtttgaattaataaaaggactc
attaaggacattgatggtgctgatgtggatgagcttgatgaggaggatttcaaggaggaa
caaaattcagttgctcgactcatacacatgctttataatgatgaaccagaggaaatgttg
aagattatatgtattgtgaggaagcataccatggttgggggaccaaaacgcctacccttt
acagtttcttcacttgttttttcagcacttaggttgcttaggcaattgcaaggtcaggag
ggggatatagtgggagaagaagcatcaatgacaccaaataaaaattttcagctcttgact
cagatcattgagtccctttcagctgttccatcccctgaacttgcattaaggttgtacctg
caatgtgctgaggcagctaatggctgtgatattgagcatgttgcgtatgaatttttcaca
caggcgtttgtattatatgaagaagaaattgcggactctaaagcccaagtgactgcaatt
catctgataattgggactctccagaggatgaatgtatttggtgttgagaacagagatact
ttgacacacaaagccacaggatattcagctcggctattgaagaaggctgatcagtgcaga
gctgtttatgcatgttcccatctattttgggttgatgatcaggatggcataaaggacggg
gagagggtcctcctttgcctaaagcgagcattgagaatcgcgaatgctgctcagcaaatg
gcaaatgttgcacgaggtagcggtgggccggttagtctctttgttgagatattgaacaag
tacatctatttctttgaaaaaggaaataagcaaatcaccagttccgcaatccaagggctg
atagaattaattaatactgagatgcaaagtgattccacaaaccctgatagtgtggcggat
gctttccttgccagcaccttgcgttacattcagttccaaaaacaaaaaggcggtgtaatg
ggtgagaaattcgaatctattaaactgtaa
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