Gossypium raimondii: 105785067
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Entry
105785067 CDS
T04129
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105785067
Enzymes [BR:
gra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
105785067
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105785067
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
105785067
NCBI-ProteinID:
XP_052487335
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Position
1:17839724..17846680
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AA seq
578 aa
AA seq
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MTPSSLSTRLTLFALLSATTFYFLYKSRRRCLKPLKHLPLNPNPRPGKLFFLTQTGTSKA
LAQRLLDLLSSKNNIPFDLVDPHTYEPEDLPKESLIIIIASTWEDGNPPQNSKFFVNWLA
DISTDFRAGNLLLSDCKFAVFGVGSRLYGDTFNAVARDLGKRLRGLGATEMVPVGEGDVD
GGELESVFEGWSEKVVTVLKGGLVMENENGIVYESDVESLESDDDDDGEGGGEDIVDLED
IAGKGPSRKKSVNVAKTNGKLDGKREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQL
RGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDDPLEIVNT
AIDLHTKMIKQTKGVPGVTQERLMEGLSPRHCALSLVGEPIMYPEINALVDELHRRRIST
FLVTNAQFPEKIKMLKPVTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLKALKEKHQ
RTVYRLTLVKGWNTEDVDLKAFYNGLNAHTRLIVAASANGVILSKSYNEAYGIIERIASR
NCQWPKNQAVSRRRVAGVHELDALASLSAQLNHQVGIK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaccccttcctcactttccacccgcctcaccctcttcgctctcctctccgctactacc
ttttactttctttacaaatcccgccgccgctgcctaaaacccctcaaacatctccctcta
aaccctaaccctagaccaggtaagctcttcttcctcacccaaaccggaacatccaaagcc
ctagctcaacgcctccttgacctcctctcctccaagaataacattcctttcgacctcgtt
gatccccacacctacgaaccggaggatctccctaaggaatccctaatcattatcatcgct
tccacctgggaagatggaaatcctccccaaaattctaaattcttcgtcaattggctcgcc
gatatcagcactgattttcgcgccgggaatttgctgctttctgattgtaaattcgccgtc
tttggagtcggtagccggctttacggggacacctttaatgcggtggcgagggatttggga
aagaggttgagagggttgggagcgacggagatggtgccggttggggaaggtgatgtggat
ggaggtgaattggagagtgtctttgaagggtggagtgaaaaggtggtcactgttttgaaa
gggggattggtgatggagaatgagaatggcattgtttatgagagtgatgttgaaagcctt
gaaagtgatgatgacgatgatggagaaggaggaggggaagacattgttgatcttgaagat
attgcaggtaaagggccatcgaggaaaaagtctgttaacgtggctaaaactaatgggaaa
ttggatgggaaaagagagatggtaactccagttataagagccaacttggagaaacaggga
tataaaattattggttcacatagtggtgttaagatctgtagatggaccaagtctcaactt
agaggacgaggaggttgttacaagcactcattttatggaatagagagtcatagatgcatg
gaggctacacctagtttggcatgtgccaataaatgtgttttctgctggaggcatcatacg
aatccagtagggaagagttggcagtggaagatggatgatcccttagagattgtcaatact
gccatagatcttcatacaaagatgattaagcaaacgaaaggagttcctggtgttacacaa
gagcgattgatggagggtctatcccctcggcactgtgccctatcacttgttggtgaacca
attatgtatcccgaaattaatgcgcttgtggatgagctgcaccgaaggcgaatctctaca
tttctagtaactaatgcacagttccctgaaaaaattaaaatgctgaagcctgtaacgcag
ttatacgtgagtgtagatgctgcaacaaaggatagcttgaaggcaattgataggccactc
tttggggatttctgggaaagattcattgattccttgaaagctctcaaagagaaacatcaa
cggactgtatatcgcttgacacttgtgaaaggatggaatacagaagatgtagatttgaag
gcattttataacggtctcaacgcacatacaagattaatagtggctgcttctgcaaatggt
gtaattttgtctaagtcttataatgaggcttatgggatcattgaaaggattgcaagtaga
aactgccaatggccgaaaaatcaagcagtttcaagaagacgtgtagccggagtgcatgaa
ctggatgcactggcttcactctctgctcagctcaatcaccaagtcggtataaagtag
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