Gossypium raimondii: 105786264
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Entry
105786264 CDS
T04129
Name
(RefSeq) ubiquitin C-terminal hydrolase 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gra
Gossypium raimondii
Pathway
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105786264
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gra01002
]
105786264
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105786264
Enzymes [BR:
gra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105786264
Peptidases and inhibitors [BR:
gra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105786264
Ubiquitin system [BR:
gra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105786264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
SASP
Motif
Other DBs
NCBI-GeneID:
105786264
NCBI-ProteinID:
XP_012468081
UniProt:
A0A0D2QHT9
LinkDB
All DBs
Position
1:48852319..48863629
Genome browser
AA seq
1114 aa
AA seq
DB search
MTLMTTPPVDQEDEEMLVPHTDIVEGPQPMEVSQVEPANTNENQQVEEPQIMKFTWTIEN
FSRLNTKKHYSDIFVVGGYKWRILIFPKGNNVDHLSMYLDVADSSALPYGWSRYAQFSLA
VVNQVHHKYSIRKDTQHQFNARESDWGFTPFMPLSDLYDPSKGYIVNDTVVVEAEVVVRK
ILDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPIGSIP
LALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVE
GTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDN
KYHAEEHGLQDAKKGVLFIEFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRED
RKYLSPDADTSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDMKR
ALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLK
IRLKKEQEEEDDKRRYKAQAHLYTIIKVARDEDLLEQIGKDIYFDLVDHDKVRSFRIQKQ
TPFNDFKEELAKEFGIPVQYQRYWIWAKRQNHTYRPNRPLTPQEEAQPVGQLRDMSNKAH
NAELKLFLEVGCGPDLRPIPPPDKTREDIMLFFKLYDPEKGELRYVGRLLVKLSGKPIEY
IAKLNQMAGFAPDEEIELYEEIKFEPCVMCEHLDKRCSFRLSQIEDGDIICFQKPLPIAS
EEACQYPDVPSFLEYVHNRQIVHFRSLERPKEDDFCLELSKIHTYDDVVERVAHKIGLDD
PSKIRLTSHNCYSQQPKPQPIKYRGVETLSEMLVHYNQTSDILYYEVLDIPLPELQGLKN
LKVAFHHATKDEVVIHNIRLPKQSTIGDVIDELKTKVELSHPNAELRLLEVFYHKIYKIF
PPSEKIENINDQYWTLRAEEVPEEEKNLGLNNRLIHVYHFSKETAQNQMQVQNFGEPFFL
VIHEGETLAEVKLRIQKKLQVSDEEFSKWKFAFMSLGQPEYLQDSDIVFKRFQRRDVYGA
WEQYLGLEHSDTSPRRTYVNQNRNTFEKPVKIYN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgactttgatgactactccgccggtagatcaagaagacgaggagatgctcgtgccgcat
acggatattgttgaaggacctcagccaatggaagtttctcaagtcgagccggctaataca
aatgagaatcagcaagtggaggaacctcaaataatgaaattcacttggacaattgagaat
ttttctaggctgaacaccaagaagcactactcagatatatttgttgttggtggctataaa
tggcggatactaatttttccaaagggaaacaatgtggaccacttgtcaatgtacctagat
gttgcggattcttccgcattgccatatggttggagtagatatgctcagtttagcttggcg
gtggttaatcaagtccatcacaagtattcaataagaaaggacactcaacaccagttcaat
gcaagagagagtgattggggtttcacaccatttatgcctctcagtgatctttatgaccct
agtaaagggtatattgtgaatgatactgttgttgttgaagctgaggttgttgtccgtaag
atattggattattggtcatatgactcaaagaaagagactggttttgttggacttaagaac
caaggagcaacttgttacatgaattcgcttctgcagaccctataccatataccatacttc
agaaaggctgtgtaccacatgccaacaactgaaaatgacatgcctataggaagtattcct
ttggctctgcagagtttattttacaagcttcaatataatgacactagtgttgcaacaaag
gagttgaccaaatcttttggatgggatacatatgattccttcatgcaacatgatgtacaa
gaactcaacagagtcttgtgtgaaaagcttgaagataaaatgaagggaactgttgtagag
gggacaatacagaagttgtttgagggtcaccatatgaattatattgaatgcatcaacgtg
gattacaagtctacaagaaaggaatcattttatgaccttcagcttgatgtcaaaggatgt
cgggatgtttatgcttcttttgataagtatgtggaagttgagcgccttgagggtgacaat
aaatatcatgctgaagaacatggcttacaggatgcgaagaaaggtgtcttatttattgaa
tttccccctgttcttcagcttcagctaaagcgttttgagtatgattttatgcgggataca
atggtaaagataaacgaccgctatgaatttcctcttcagcttgaccttgatagagaagat
cggaagtatctatcgcctgatgctgatacgagtgttcgcaacctttacactctccacagt
gtcttagttcatagtggaggagtacatggtggacattattatgcttttatcaggccgacc
ctttctgaccaatggtataaattcgatgacgaacgggtaacaaaagaagatatgaagagg
gcattggaagagcagtatggtggcgaggaagagttgccacagacaaatcctggcttcaat
aacacacctttcaaatttacaaaatactcaaatgcatacatgcttgtttatatacgtgaa
agtgataaggacaaaataatttgcaatgttgatgagaaggatattgctgaacatttgaag
ataaggttaaagaaagaacaggaagaggaggacgacaaaaggagatataaagcacaggct
cacctttatactattataaaggttgcaagagatgaagatcttctagaacagattggaaag
gacatatattttgatcttgtggatcatgacaaagttaggagtttccgtattcagaagcag
acacctttcaatgattttaaggaggaacttgcaaaagagtttggcataccagtgcaatat
caacgttactggatttgggcgaagaggcagaaccatacatatcgtccgaatcgaccttta
acccctcaggaggaggctcagcctgttggacagttgagggatatgtcaaataaggctcat
aatgcagaactaaaactgttcttggaagttgggtgtggaccggatttacggcctattcct
ccacctgacaaaacaagggaagatattatgcttttcttcaagctttatgaccctgagaaa
ggagaattacgttatgttggtaggctcttggtaaaactttctggtaagccaatagaatat
atagccaagctaaatcaaatggctggctttgctcctgatgaagaaattgaactttatgag
gaaataaagtttgagccttgtgtgatgtgtgagcatcttgataaaagatgttcattccgg
ttaagtcagattgaagatggggatattatatgctttcagaagcctcttccaattgcaagt
gaagaagcatgccaatatccagatgtgccttcatttctggagtatgtgcacaatcgtcag
attgttcattttcgttctctggagagaccaaaggaagatgatttctgtctagagttgtca
aagatacatacttatgatgatgttgtggaaagagtggctcacaaaattggcttggatgat
ccatccaaaatcaggctcacatctcacaactgctactctcaacaacctaagcctcaacct
attaaataccgaggagtagagactctgtcagaaatgttggtccactataatcagacttct
gacattttgtattatgaagttctggatatccctttgccagaattgcaaggtctgaaaaac
ctgaaagttgctttccatcatgctactaaggatgaagtggtaattcataatattagattg
cccaaacagagcactattggagatgtgattgatgaacttaagactaaggtggagttgtca
catcctaatgcagagcttagattgcttgaagtcttctatcacaagatctacaagatattt
ccacccagtgaaaagattgagaacataaatgatcagtattggacattgcgtgcagaagag
gtcccagaagaagaaaagaatcttggtctcaataatcgattgattcatgtctaccacttc
agtaaagagactgcccagaaccagatgcaagtgcaaaattttggtgagccctttttcttg
gtcattcatgaaggtgaaactctggctgaagttaaattgcggatacaaaagaaattgcaa
gtttctgatgaagagttctccaagtggaagtttgcatttatgtcattgggtcaaccagag
tacctacaagactctgacattgtgttcaaacgttttcagagaagagatgtttatggggct
tgggagcaataccttgggttagagcattctgatacctctcctagaaggacttatgttaat
cagaaccgtaacacatttgagaaaccagttaaaatatacaactag
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