Gossypium raimondii: 105786407
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Entry
105786407 CDS
T04129
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105786407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105786407
04147 Exosome [BR:
gra04147
]
105786407
04090 CD molecules [BR:
gra04090
]
105786407
Enzymes [BR:
gra01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
105786407
Transporters [BR:
gra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
105786407
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105786407
CD molecules [BR:
gra04090
]
Proteins
105786407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
Zeta_toxin
AAA_29
AAA_22
RsgA_GTPase
AAA_15
AAA_5
nSTAND1
SbcC_Walker_B
APS_kinase
DUF815
AAA_25
DUF87
Rad17
DUF1360
Motif
Other DBs
NCBI-GeneID:
105786407
NCBI-ProteinID:
XP_012468270
UniProt:
A0A0D2QIK4
LinkDB
All DBs
Position
1:50730698..50736332
Genome browser
AA seq
1328 aa
AA seq
DB search
MSKDSEEIKRIEQWKWSEMQGLELVSDPSLNPKIQTEEASSSSCSKLESDNNGGNEEKLQ
QEVPSIGFNELFRFADGLDYVLMGIGSLGALVHGCSLPIFLRFFADLVNSFGSNANNMDK
MTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQDIQYFDTE
VRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLGVVPLI
AVIGAIHTITLAKLSAKTQEALSQGGNIVEQTIVQIRVVSAFVGESKALQAYSSALKVAQ
KIGYKTGFGKGMGLGATYFVVFCSYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGL
GQSAPSMSAFAKAKVAAAKIFRIIDHKPGIDRDSESGLELESVTGLVELRNVDFAYPSRP
DVKILNNVSLCVPSGKTIALVGSSGSGKSTVVSLIERFYDPTSGEVMLDGHDIKTLKLRW
LRSQIGLVSQEPALFATTIKENILLGRPDANDIEIEEAARVANAHSFIVKLPDGFDTQVG
ERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVI
AHRLSTIRKADLVAVLQEGSVSEIGTHDELMAKGENGAYAKLIRMQEAAHETALNNARKS
SARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLEGYHPNYRMEKLDFKEQ
AGSFWRLVKMNSPEWIYALFGSIGSIVCGSLSAFFAYVLSAVLSVYYNPDHAYMIREIGK
YCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARI
AARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVL
QKMFMKGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSENKIVRLFSSNLQTPLKHCFWK
GQIAGSGFGVAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTL
APDFIKGGRAMQSVFELLDRKTEIEPDDPDATQVPDRLRGEVELKHVDFSYPSRPDIPIF
RDLNLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVMIDGKDIRKYNLKSLRKHI
SIVPQEPCLFATTIYENIGYGHESATEAEIIEAATLANAHKFISSMPDGYKTFVGERGVQ
LSGGQKQRIAIARALVRKAELMLLDEATSALDAESERSVQEALHRACSGKTTIVVAHRLS
TIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYARMIQLQRFTNSQVFEMTSGSSSSKQ
KEVNEREG
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagattctgaagagataaagaggatagaacaatggaaatggtctgaaatgcaa
ggccttgaacttgtttctgatccttctttaaaccccaaaattcaaacagaagaagcttct
tcttcatcttgttcaaagcttgaaagtgacaacaatggtggaaatgaagagaagctacaa
caagaagtgccttcaattgggttcaatgaattatttagatttgcagatggtttagattat
gtattaatgggaattggttcacttggagctcttgttcatggctgttctttacctattttc
cttcgtttctttgctgatcttgttaattcctttggttctaatgctaataatatggacaag
atgacgcaagaagttctgaagtatgcgttttatttccttgtggtgggtgctgcaatttgg
gcatcttcatgggcagaaatttcatgttggatgtggactggtgaaagacaaacaacaaag
atgagaattaagtatttagaagcagctttgaatcaagacattcaatattttgatactgaa
gttcgaacatctgatgttgtttttgccattaatactgatgctgtaatggttcaagatgct
attagtgagaagttgggtaatttcattcattacatggcaacatttgtgtctggctttgtg
gtgggtttcacagcagtatggcaattagctttggttacacttggagttgttccattaatt
gctgtaattggagcaatacataccataacattagctaaactctctgctaaaacacaagaa
gctttatcacaaggtgggaacattgtggaacagacaatagttcaaatccgggttgtttcg
gcttttgtcggtgaatcgaaagcattacaagcttactcatcagcattgaaagtagcacaa
aagataggttataaaactggatttggaaagggaatgggattgggggcaacctactttgtt
gtgttctgttcttatgctttgcttctttggtatggaggttatctggttagacatcattac
actaatggaggacttgccattgccaccatgtttgcagttatgattggtggattgggtttg
ggacagtctgcaccaagcatgtctgcatttgcaaaggctaaagtggcagcagcgaaaatt
ttccgtattatcgatcataaacccggtatcgatagagatagcgagtcgggtttggagttg
gaatcggttaccggtttagttgagttgagaaatgtggattttgcatacccttcaagaccc
gatgtaaagattcttaacaatgtttccttatgtgttccttctggaaaaaccatagctttg
gtcggaagtagcggttcggggaaaagcaccgtggtatcacttattgagagattttacgat
cctacttcaggggaagtgatgctagatggacacgacataaagacattaaagctaagatgg
ttaaggtcacaaataggacttgtaagccaagagcctgcactttttgctaccaccattaaa
gaaaacatccttttagggaggcctgatgcgaacgatatcgagattgaagaagctgcgagg
gtggctaatgctcattcattcattgtgaagctacctgatggtttcgacactcaggttggg
gagagaggacttcaactctcaggtggacagaagcaaagaatcgctatagcgagggcaatg
ttgaagaatccggcaatcctgttattggatgaagctactagtgcactagattctgagtcc
gaaaagctggtgcaagaggcccttgatcggtttatgattgggaggactactctcgtaatt
gctcatcggctttccactattcggaaggctgatcttgtagctgtactccaggagggaagt
gtttcggaaatcggtacgcatgatgaacttatggccaaaggagaaaacggtgcttatgct
aaactcattcggatgcaagaggcagcacacgaaactgcccttaataatgctagaaaaagt
agtgcaaggccatctagtgctcggaactcagtaagctcaccaatcattgcccggaattca
tcatatggccgctcaccatattcacgcaggctgtctgacttctctacttcggattttagc
ctttcccttgagggataccaccctaattaccgaatggaaaagcttgatttcaaggagcag
gcgggttccttctggcgtcttgtgaaaatgaattcacctgaatggatttatgctttattt
ggttctataggatccattgtttgcggctcccttagcgctttctttgcttatgtgctgagt
gctgttctcagtgtctactacaacccagaccatgcttacatgattcgagaaatcgggaaa
tactgctatctgttaattggactttcatcggctgcacttctcttcaacacactacagcat
tctttttgggatattgtgggagaaaatctcacgaaacgagtgcgagagaagatgctgact
gcagtgctgaaaaatgaaatggcatggttcgatcaggaggaaaacgagagtgctaggatt
gctgcaaggttagctcttgatgcgaacaatgtacgatcagctattggagaccggatttca
gttatcgtgcagaacacggcactcatgcttgttgcttgcactgctggttttgttttgcag
tggcgtcttgcccttgtcctcattgcagtcttccctgtggttgtagcagccaccgttttg
cagaaaatgtttatgaaaggtttctcaggagatttagaagctgctcatgccaaggccact
caactagctggagaggccattgccaatgtaagaactgttgctgcattcaattccgagaac
aaaatcgtccgccttttctcctcaaaccttcaaactccattgaaacactgcttttggaaa
ggacaaattgcaggaagcgggtttggggtagctcagtttgcactatatgcttcttatgca
cttggcctttggtatgcttcatggcttgtgaagcatgggatctctgatttttccaaaaca
atccgagtctttatggttcttatggtctctgccaatggtgcagccgaaacattgaccctg
gctccagacttcatcaaaggaggtcgagccatgcaatcagtctttgaacttcttgaccgt
aaaactgagatcgagcctgatgaccctgatgccacacaagttccagatcggcttcgtgga
gaagttgaactaaagcatgtagacttctcttacccttcacgtcctgacatcccaattttc
cgggaccttaatctccgcgcccgagccggaaaaacccttgcccttgttggtccaagtgga
tgtggtaaaagctcggttattgcacttatacaaagattttacgagccctcatctggacgt
gttatgatagatggaaaagacataaggaaatacaacctcaaatcgctgagaaaacacatt
tcaatcgttccacaagagccttgcctctttgctaccactatttacgaaaacattggctac
ggacatgaatctgcaaccgaggccgagatcattgaggcagctacactagccaacgcccac
aagttcatatcctcaatgcccgacggttacaaaacgtttgttggggagagaggggttcaa
ctttcaggaggccaaaaacagagaattgccatcgcaagggctctagtgaggaaagcagag
cttatgctgctcgatgaagcaaccagtgccctcgatgctgagtctgagagatcagtccaa
gaggctctacaccgtgcttgctcgggtaaaactacgattgtggtggctcatcggttatca
acaatcagaaatgctcatgtcattgcagtaattgatgatgggaaagttgcagagcaagga
tcccattcacatttactcaaaaactatcctgatggatgttatgcacggatgatacaatta
caaaggttcacaaatagccaagtttttgaaatgacctcaggctcaagctcgtcaaaacaa
aaggaagtcaatgaaagagaaggttaa
DBGET
integrated database retrieval system
