Gossypium raimondii: 105790782
Help
Entry
105790782 CDS
T04129
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105790782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105790782
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
105790782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
105790782
NCBI-ProteinID:
XP_012473987
UniProt:
A0A0D2P8W8
LinkDB
All DBs
Position
8:10907717..10911088
Genome browser
AA seq
586 aa
AA seq
DB search
MHKKMAFSFPDEVLEHVFSFIQSDKDRNAVSMVCKSWYEIERWCRRKVFVGNCYAVSPRM
VIRRFPEFRSIELKGKPHFADFNLVPDGWGGYVSPWIEEMAGAYPWLEEIRLKRMVVTDE
SLELIAKSFKNFKVLVLSSCEGFSTDGLAVIAASCKNLKELDLRDCEVDDLSAHWLSHFP
ETYTSLVSLNISCLGSDEVSFSALERLVGRCTNLKTLRLNRAVPLDKIANILRHAPQLVE
FGTGTYTADVRPDVYSDLAGVFSSCKELKSLSGFWDVVPDYLPAIYPVCSKLTSLNLSYA
TIQSPDLIKLVSHCPNLQRLLVLDYIEDSGLEVLASSCKDLQELRVFPSDPFGAEPNVSL
TERGLVAVSLGCPKLQSVLYFCRRMSNEALVTIARNRPNFTRFRLCIIEPKTADYLTLEP
LDVGFGAIVQYCKDLKRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSG
CESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCAVSFAACKLLGQKMPRLNVEVID
ERGPPDSRPENCPVDKLYIYRSIAGPRFDMPPFVWTMDEDSGLRLS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaaaatggcgttttcgttcccagacgaggtgctggagcatgtgttctcattc
atacaatcagataaagaccggaacgcggtgtcgatggtgtgtaaatcgtggtacgagatc
gagcgttggtgccggaggaaagtgtttgtggggaactgttacgctgtgagcccgaggatg
gtgatcagacggttccccgagtttagatccattgagttgaaagggaaaccgcactttgcg
gatttcaatctggtgccggacggatggggaggttacgtgtctccctggatcgaggagatg
gctggagcttatccttggctcgaagagattcgacttaaaaggatggtcgttaccgacgaa
agcttggagcttattgctaagtcgtttaagaacttcaaagtgttggtgctttcttcttgt
gaagggttttcaactgatggtctcgctgtcattgctgctagctgcaagaatctgaaagag
ctggacttgcgagactgtgaagtggatgatttgagtgcgcattggctcagtcattttccc
gaaacatacacatcactggtgtcccttaacatttcttgcttagggtctgatgaagttagt
ttttcagcgttggaacgactggtgggtagatgtactaacctcaagactctccggctcaac
cgtgcagtgcccctggataagattgccaacattttacgtcatgcaccgcagctggttgaa
ttcggtactggcacctacacggctgatgtacggccagatgtctactcagatttggccgga
gtgttttctagttgcaaggaactaaagagcttgtctggattttgggatgtggtcccggat
taccttcctgccatttaccctgtctgctcaaaattaacatcactgaacctgagctatgct
actatacaaagtcctgatcttatcaagcttgtaagccactgtccgaatttgcagcgccta
ttggtacttgattacattgaagatagtgggcttgaggtgcttgcatctagttgcaaggac
ttgcaggaattacgtgtgtttccatctgatccatttggtgcagagccaaatgtgtccttg
acagaacggggccttgttgccgtatctttgggttgtcccaagctacaatcagtattgtac
ttctgccgccgaatgtctaatgaggcattagttactattgctcggaaccgtccaaacttc
acaaggtttcgcctttgtataattgagcctaaaacagctgattacctgactctcgagcca
cttgatgttggttttggagccattgttcagtactgcaaggatctcaagcgtctttccctc
tctggtcttcttacagatcgtgtattcgaatatattgggacatacgcgaagaagcttgag
atgctgtctgtggcttttgcaggagatagtgatttgggactacatcatgtgctttccggg
tgtgaaagccttcggaaactggagatcagagattgcccctttggtgacaaggctcttttg
gccaatgctgcaaagctggagacaatgcgatccctttggatgtcttcttgcgctgtgagc
ttcgcagcatgtaagctgctaggtcagaagatgccaaggttgaatgttgaagttatagat
gagaggggacctcctgattcaagaccagagaactgcccagttgataagctctacatatat
aggtccattgcagggccaaggttcgacatgcctccttttgtttggacaatggatgaagat
tctggattgaggctttcatga
DBGET
integrated database retrieval system
