Gossypium raimondii: 105792332
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Entry
105792332 CDS
T04129
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105792332
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gra04812
]
105792332
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
105792332
Cytoskeleton proteins [BR:
gra04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
105792332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
Adaptin_N
PDS5
Cnd1
MMS19_C
Maestro_HEAT
UTP20_C
Tti2
Sec7-like_HUS
Dopey_N
Rif1_N
V-ATPase_H_N
IFRD
Npa1
DUF3385
SEN1_N
Motif
Other DBs
NCBI-GeneID:
105792332
NCBI-ProteinID:
XP_012476310
UniProt:
A0A0D2R911
LinkDB
All DBs
Position
8:56147604..56158195
Genome browser
AA seq
1435 aa
AA seq
DB search
MEEALELARAKDTKVRMAAVERLYQLLEGTRKNLTSSEVTSIVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDGKQPVRDAARHLLVTLMEVSSPTIIVE
RAGSYAWRHKSWRVREEFARTVTSAISLFASTELPLQRAILPPILQMLSDPNLGVREAAI
LCIEEMYRQAGTQFRDELHRHQLPASMVRDINARLEKIEPQVRSSDGILGGFGSGEMKPA
ILNPKKSSPRAKSSSRESSLFAGESDITEKPIDPIKVYSEKELIREFEKISSTLVPEKDW
SVRIAAMQRVEGLVFGGAADYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLSKE
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRN
AVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFNKT
WPDRSRRLFSSFDPAIQRIINEEDGGMHRRHASPSLRDRNVQMSFTTRTSSTSNIPGYGT
SAIVAMDRTSSLSSGTSFSSGMNLSQSKPLGKGAERTLESVLHASKQKVSAIESMLRGLD
ISEKQRSTSLDLGVEPPSSRDPPFPAVVPASHSLTSSLGLESSTSGVGKGSNRNGGLIMS
DIISQIQASKDSGKLSYRSTVATESLPTFSSYSAKRASERQDRGSFEENSDIREARRLTN
PHIEGQYLEMPYRDVSSRDSHNNYIPNFQRPLLRKHVAGRMSAGRRRSFDDNQLSLGEMS
NYVEGPASLNDALSEGLSPSSDWSARVAAFSYLRSLLKQGPRGIQEVVQTFEKVMKLFFQ
HLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLEI
VSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAVNPEGSGNIGILKLWLAK
LTPLAHDKNTKLKDAAITCIISVYTHFDPTAVLNFILSLSVEEQNSLRRALKQYTPRIEV
DLINFLQNKKERQRSKSSYDPYDVVGTSSEEGYIGVSKKSAFLGRYSSSSIDSEGGRKWG
TTQESTLITGSIGLATSDETRENLYQNFETSPNADVLLSKTNESSYMVYSMSQNLGSRNL
ESNFNLEGVSTPQLEINGLSRSDSLGAIGGVAHNYETSSGLDLNHLKPAAVKINSMPDAG
PSIPQILHMICNGNDESPTASKRSALEQLTEISAANDPSIWNKYFNQILTAILEVLDDSD
SSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSNEAEHCLNTVLSQYD
PFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPSLFEAFGNQSAD
VRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTPIDANQ
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcattggagctggcacgtgccaaagacaccaaggtgcgaatggcggcggtg
gaacggctttaccaactcctcgaaggtactagaaagaatctcacttcttcggaagtcact
tcgatagttgactgctgcttggatctcctcaaggacaacaacttcagagtctcccagggt
gctctccaggcacttgcttccgcggccgttctatccggtgatcacttgaagttgcacttt
aatgcgctcgttcccgcggttgttgaacggttaggtgacggcaaacagcctgttagggat
gctgctagacatttactggtcactctcatggaggtttcttctccaactattatcgtcgaa
agagctggctcttatgcctggagacacaaaagttggagagttcgggaggagtttgcccgg
accgtgacatctgcaataagtctttttgcatctactgaacttccacttcaacgggctatt
cttccacctattttgcagatgttaagtgacccaaatcttggtgttcgtgaagctgctata
ttgtgcattgaggaaatgtataggcaggctggtacccaattccgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatatcaatgctagactagagaaaattgagcca
caagttagatcttcagatggaattttgggtggttttggttctggagagatgaagcctgca
atccttaaccccaagaaaagcagtccaagagccaagagttcttcgagggagtcatctctt
tttgcaggtgaaagtgatatcacagaaaaacccatagatccgattaaagtttactcagag
aaggagctgataagggaatttgagaaaatttcttctactcttgtgccggaaaaagattgg
tctgtacgcattgctgccatgcagagggttgaaggccttgtttttggaggagctgctgat
tatccatgtttccggggactcttaaagcagcttgttggccccctaagtacacaattatca
gatagaaggtcaagcattgtgaagcaggcttgccatttattatcattcttatcgaaggag
ctattgggagattttgaggcatgtgctgagatcttcattccagtccttttcaagttggtt
gtgattactgtgcttgtaattgcagagtctgctgataattgcataaaaacgatgttgcgt
aactgcaaagttgctcgtgtacttcctcgcatagctgattgtgcaaagaacgaccgtaat
gctgtactccgtgccaggtgctgtgaatatgcattgttgatacttgaacattggccagat
gcacctgaaatacagcgatcggctgatttatatgaggatctgattagatgttgtgttgct
gatgcaatgagtgaggtaagatcaactgctagaatgtgctatagaatgttcaacaaaact
tggccagatcgttctcgtcgcttgttctcctcctttgatcctgccattcaaaggataatt
aatgaagaagatggagggatgcataggcggcatgcttctccttctctccgtgacaggaat
gtacagatgtcatttaccactcgaacttcttctacttcaaatatacctggatatggaaca
tctgctatagttgcaatggacagaacttccagtttatcttcagggacgtccttttcttct
gggatgaatttatcccagtcaaagccccttggtaaaggtgctgagcgtactctggagagt
gtattgcatgcaagcaaacagaaagtgagtgccatcgaaagtatgcttagaggtctggac
atttccgaaaaacagaggtcaacaagcttggatctaggagttgagcctccatcatctcgt
gatccaccattccctgctgttgttccagcttctcacagtctcacaagctctttaggacta
gaatcaagtacctctggtgtcggtaagggtagtaaccgtaacggtggtctgatcatgtct
gacatcatttctcaaattcaagcttccaaagactcgggcaagttatcatatagaagtact
gtggcaacagagtctctgccaactttctcatcatactcggccaagagggcatctgaaaga
caagatcgtggttcctttgaagagaatagtgacatcagggaggccaggcggcttacaaat
ccacatattgaagggcaatatttggaaatgccatacagagatgtaagctctagggattca
cataacaattacattcctaacttccaaaggccgcttttgagaaagcatgtagctgggcgt
atgtctgctggaaggagaagaagttttgatgataaccagctgtcacttggagagatgtca
aattatgttgaaggtccagcttctctcaatgatgccttaagtgagggacttagtcctagt
tctgattggtctgcaagggttgctgctttttcttatctccggtctttgttgaagcaaggc
ccaagaggtattcaggaagtggttcaaacttttgagaaggtaatgaaactgtttttccag
cacttggatgacccccaccataaagttgcacaggctgccctttcaactcttgcagatatt
attccatcatgccgaaagccctttgagagttacatggaaaggatcttaccccatgttttc
tcacgcttaattgatcccaaggagttggttaggcaaccttgctcaacgacattggaaata
gtaagtaagacttatagcatagattctctcttacctgctttgctgcgttcactggatgaa
cagcggtcgccaaaggcaaaattggctgttattgagtttgccattagttccttcaacaag
catgctgtgaatcctgaaggttctggtaacattggcatcctgaagttatggcttgctaag
ttgacgccattggcccatgataaaaatactaagcttaaggatgcagctattacttgcatc
atatctgtatacacgcatttcgatccaaccgctgttctgaattttattcttagtttatca
gttgaagaacaaaattccttgagacgggcacttaagcagtacacacctcgtattgaggtg
gatctaataaactttttgcaaaacaagaaagagagacagcgctctaagtcatcctatgat
ccctatgatgttgtaggaacatcatctgaagaaggatatattggtgtgtccaagaagagt
gctttccttgggaggtattcttccagttccattgatagtgaaggaggtaggaaatggggt
accacccaggaatcaaccctgatcactggcagtattggcctggcaacatctgatgaaact
cgggagaacttatatcagaactttgagaccagtccaaatgcagatgttcttctttctaaa
actaatgaatcatcttatatggtttattccatgagtcagaacttgggatctcgaaacttg
gaaagtaattttaacttggaaggtgtatctactccacaactggaaattaatggtctgagt
agatccgactcattaggggctattggtggggttgctcataattatgagacttcatcaggt
ttagatcttaatcaccttaaaccagcagctgtaaagattaactccatgccagatgctggg
cctagcattcctcaaattcttcacatgatctgcaatgggaatgatgagagccctaccgca
agtaagcgcagtgcacttgagcaattaactgaaatttctgcggctaatgatccctcgatt
tggaacaagtacttcaatcagattttgacagctatacttgaagttttagatgattctgat
tcttcaatcagagaacttgcgctgtcattgatagttgaaatgcttaaaaaccagaaagat
gctatggaagattctgttgaaatagtaattgagaagctgcttcatgtaacaaaggatatt
gttccaaaagtttcaaatgaagctgagcactgcttgaacactgtgctgtctcagtatgat
ccattcagatgtttaagtgtcattgtacctttattagttactgaagatgagaagactcta
gttatttgcataaattgtttaacgaagcttgtgggccggctatcacaggaggaactaatg
gctcaactgccctcatttttgccttctctttttgaagctttcggaaaccagagtgcggat
gtccggaagacggtggttttctgtttggtggatatttatataatgcttgggaaagcattt
ttaccacacttggagggacttaacagcacacagttgcggttagttacaatctatgctaat
cggatttcacaggccaggactggtacccctatagatgctaaccaatga
DBGET
integrated database retrieval system