Gossypium raimondii: 105794095
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Entry
105794095 CDS
T04129
Name
(RefSeq) WD repeat-containing protein RUP2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
gra04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105794095
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105794095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105794095
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105794095
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105794095
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
105794095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_like
YNR034W-A-like
Motif
Other DBs
NCBI-GeneID:
105794095
NCBI-ProteinID:
XP_012478537
UniProt:
A0A0D2NC37
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All DBs
Position
3:complement(32850380..32851723)
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AA seq
409 aa
AA seq
DB search
MGAIDWSKSPKPSNTTISLSFEWAMKNLSSGIHPTLPTKQTLKHQGDRLEIPSAAARCEW
DFSLSTVVSSSANAAVSDALGSIEFDPSNTVVATGGIARKIRIYSLNSLLPEDNIQLLTR
GEQNDTAFLDHVNACSFYICTPAKLSSLRWRPGSGGRLLGSGDYDGVVMEYDLERKLPVF
ERDEHGGRRVWSVDYSHWDPFVGASGSDDGTMQMWDPRCGGEGGECVAKVQPAAARSSVC
CVEFSPFGDSLIALGCADRMAYAYDVRKMVEPLHVLEGHTKTVTYVRFLDAQTMVSAGTD
GCLKLWNMSDCGLIRTCKGHVNSRSFVGLSVWRHGGLLGCGSENNQVFVYDKRWDEPICA
RGLEPMARPGFGHAFVSSVCWRQVQEDHCTLLAGGSDGVLQVFVGTKIS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgggagccattgattggtctaaaagtccaaaaccctccaacaccaccatctccctttca
tttgaatgggcaatgaaaaatctctcctctggaatccacccaaccctccctacgaaacaa
acactaaaacaccaaggagatcggttggaaataccatcagcagcagctcgttgtgagtgg
gatttttctctttccaccgtcgtctcctccagcgccaatgccgccgtctccgacgctctt
ggctccatcgaattcgacccttctaataccgtcgtagcaacaggagggatcgcaagaaag
attaggatttacagtttgaattctttgctaccggaagacaacatccaattattaacccga
ggtgaacaaaacgatactgcctttctagaccatgttaatgcatgtagcttttacatatgt
actccagctaagctcagcagccttagatggagacccggttccggaggccgccttctcggt
tcgggagactacgacggggtggtcatggaatatgatctagagcggaagcttccggtcttc
gaacgggatgagcacggcgggagacgggtttggagcgtggactattcgcattgggatcca
tttgttggtgcatctggctcagatgatggcaccatgcaaatgtgggacccacgatgtggc
ggcgaaggaggggaatgcgtggctaaggtgcagcccgccgcggctcgtagctcggtctgt
tgcgtggagttcagccccttcggcgattcgttaatagcgctgggatgcgcagaccggatg
gcgtatgcgtacgatgtgcggaaaatggtggagcctttgcatgtgttggaaggacatacg
aaaacggtgacgtacgttagatttttggatgcccaaacaatggtttcagcaggaacggat
gggtgtttaaagctgtggaatatgagtgattgtggtttgattagaacgtgcaaagggcat
gtgaatagtcgaagcttcgttgggctgtcagtttggagacatggtgggttgcttggatgt
gggtcagaaaataaccaggtatttgtttatgataagaggtgggatgagcccatttgcgcg
cgggggttggagccaatggctagacctgggttcggccatgccttcgtcagtagcgtatgc
tggaggcaagtccaggaagaccactgcacacttttggctgggggttccgatggggtttta
caggtttttgtgggcacaaaaatatcatag
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