Gossypium raimondii: 105802855
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Entry
105802855 CDS
T04129
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X3
KO
K12133
MYB-related transcription factor LHY
Organism
gra
Gossypium raimondii
Pathway
gra04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105802855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105802855
Transcription factors [BR:
gra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
105802855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
105802855
NCBI-ProteinID:
XP_012490196
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Position
11:complement(54335519..54341374)
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AA seq
678 aa
AA seq
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MLKNSSLRSFGAFLLMLISNLEKEALTKGIPTGQALDIEIPPPRPKRKPRNPYPRKMSAA
TSVQMGAKDGKSETPVSSLHCKQAFNLEKEPLPERSSRDEKSSNLKEILDDNCSEVFTLL
HEANCSSMSSVNKNFIPTSTVLRNSCPLREFVPSVKETINKDTSKPSNLENSCTSYEKPA
QVQRKDDMDGAICTDEMQATHNNPQHVAVHVLDGSPGTCAPNPSMDITFQDSIFHPMGDI
HGQVNLFANPAASATTAHQNNAPRSTHQAFPTFHTPFMHLQPNQEDYRSFLHVSSAFSSL
VVSTLLQNPAAHAAASFAATFWPYANVQNSDDSPACDQEGFPSRQMNSATGMAAIAAATA
WWAAHGLLSVCAPLQTGCTCAPASTATVTPMENGEAPAAKMERKMYAGQDPSMQDQRLDP
QYAEAMQCQRSASKSPTSSSDREESGEAKANTEVKATAVTEPQDPNKTKNGKQVDRSSCG
SNTPSSSDVEMDVLEKNKEDKEQKEDSKAADANHPQVECSNRRGRSSTNLSDSWKEVSEG
GRLAFQALFSREVLPQSFSPPHDRENTEKQKGSVGADEQNPDQNNGETSVLHFSSEACRS
CSDNQGVEKKALSKAKNIVDESLLTIGLGHEKLKARQTGFKPYKRCSVEAKESRVMNTGS
QGEEKDPKRIRLEGEALT
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaattcttctctaaggtcatttggtgccttcttgcttatgcttatatccaat
ctggagaaggaagcacttactaagggcattccaactggtcaagctcttgatatagaaatt
ccacctccacgtcctaaaagaaaaccgagaaacccttaccctcggaaaatgagtgctgct
acctctgtgcagatgggagcaaaggatggaaaatctgaaactccagtatcttctttgcat
tgcaaacaggctttcaacttggagaaagaaccactcccagagagatctagcagagatgaa
aaatcttcaaatctgaaagaaattctagatgataattgctctgaggtttttacccttctc
catgaagcaaactgctcctccatgtcttctgtgaacaagaattttataccaacatcaaca
gtgcttagaaattcttgccctcttagggagtttgtaccttcagtaaaggagacaattaat
aaagatacaagtaagccttcaaacttggagaattcttgcacttcatatgagaaaccagct
caagttcagagaaaagatgatatggacggtgctatatgtacagatgagatgcaagccact
cataataatcctcaacatgttgctgtgcatgtcctcgatggaagcccaggaacatgtgct
ccaaatccttccatggatataacttttcaggattctatatttcaccctatgggtgatatt
catggacaagttaacctgtttgcaaatccagcggcatctgctaccactgcacatcagaat
aatgcaccaagatcaactcatcaggcgtttccaacgtttcatactccctttatgcatctt
cagcccaatcaagaggactaccgatcatttctacacgtctcttccgctttttcaagtctc
gttgtatctactttattacagaatccagctgctcatgctgcagcaagctttgcagctaca
ttttggccatatgcaaatgttcaaaattctgatgattctcctgcttgtgaccaggaaggt
tttccttctagacaaatgaactctgctacaggtatggctgcaattgcagctgccactgct
tggtgggctgcgcatggactgctttccgtatgtgctcctctgcagactggctgtacttgt
gctcctgcatccactgctacagtaactcctatggagaatggtgaagctccggctgcaaag
atggaaagaaaaatgtatgctggtcaagatccatctatgcaggatcaacggttggaccct
caatatgctgaagctatgcaatgtcaacgatcagcatctaaatcacctacatcatcatca
gaccgtgaagagagtggtgaggcaaaagcaaatactgaagtgaaagcaactgcagtaact
gagcctcaagatccaaataaaacaaagaatggaaaacaagttgaccgatcttcatgtggt
tccaatacaccttcttctagcgacgtggagatggatgtattagaaaagaacaaggaagac
aaggaacaaaaggaagattcgaaggcagctgatgcaaatcatccacaagttgaatgtagc
aatcgccgtggcagaagcagtaccaacctgagtgattcttggaaggaggtatctgaaggg
ggccgactggcttttcaagctctcttctccagagaagtactaccacaaagcttttctcct
cctcatgacagagagaatacggagaagcaaaagggaagtgtaggtgcagatgagcaaaat
ccagatcagaataatggagagacatcagttttacacttctccagcgaggcatgccgatct
tgttctgataatcaaggagtcgagaaaaaagcgttgtcaaaagctaagaacattgtggac
gagagcttgctgacgattgggctaggacatgaaaagcttaaggcccgtcaaacaggattt
aaaccttacaaaaggtgttctgtggaggccaaggaaagcagagtgatgaacacaggcagt
caaggtgaagagaaagatcccaagaggatacgcttggaaggggaagcactgacttga
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