Granulicella sp. 5B5: GOB94_00475
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Entry
GOB94_00475 CDS
T08433
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
grb
Granulicella sp. 5B5
Pathway
grb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOB94_00475 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grb03019
]
GOB94_00475 (pnp)
03016 Transfer RNA biogenesis [BR:
grb03016
]
GOB94_00475 (pnp)
Enzymes [BR:
grb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GOB94_00475 (pnp)
Messenger RNA biogenesis [BR:
grb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GOB94_00475 (pnp)
Transfer RNA biogenesis [BR:
grb03016
]
Prokaryotic type
tRNA degradation factors
GOB94_00475 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
GcvP2_C
Motif
Other DBs
NCBI-ProteinID:
QMV17355
UniProt:
A0A7D7XAZ2
LinkDB
All DBs
Position
117173..119626
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AA seq
817 aa
AA seq
DB search
MKQEVYVELAGGKHIKFETGRIAKQASGAAFTTSGDNAVLATAVASPDPKEGIDFFPLTV
EYREFTYAGGRIPGGFIKREGRPSEKEILTSRQIDRPIRPLFPEAFRNETQVVAFVYSAD
KENDPDVLGINGASCALSLSDIPFHGPVGAVRIGYIDEQYIVNPTYSERLVSLLNIMVVG
TKDGIVMVESGAKEVSEEVVLGAIEFAHVEIKKIVAGIEELVKLAGKPKRAVTPLENDTE
YAAALKAKVGDKLADALNTKKYPKFESYAKVKEIKDELKKELPADDAAAAKKLSKYFEGL
RETIFREQVLNDRIRPDHRAFDEIRNITIETGVLPRVHGSALFTRGETQALVSATLGTTD
DAQRMESYEGEQKRRFMLHYNFPPFSVGEVGRMTGVGRREIGHGALAWRAIEAVLPGEDE
SPYTLRVVSDILESNGSSSMATVCGASLSLMQAGIPLKGSVAGVAMGLVKEEDKYAILTD
IAGAEDHYGDMDFKVAGTRKGITALQMDIKIMGLTAQILREALEQARQGRMFILDKMDAV
ISKASEEKSAFAPRIHTIQIPTDKIRDLIGPGGKVIRGIVDATGVKIDVDDSGRVNVASS
DADGLAKAIQMISDITAVPEVGKTYLGKVVRLAEFGAFVEIFPGTDGLLHVSEIAEHRVK
EVKDELREGDQVLVKVLAIEGNRIKLSRKAVLREQREKLGLPPVPEQSGGGERSDRGERG
GRDRDRGGRDRNERGERPVAPPPSEAPLDDDDEEFEDDEFEGDEDGEDEGDEAPAPEAGN
AAAPAANGTPRPQGQRRGRRRRSRRPGAGGAPQGGNE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggaagtatatgtagagcttgccggtggtaagcacatcaagtttgagacaggg
cggatcgccaagcaggcctccggcgcagcctttacgaccagcggcgataatgccgtgctg
gcaaccgcagtggcctcgcccgatccgaaagagggcatcgactttttcccgctgacggtg
gagtatcgcgagttcacctatgccggtggccgcatcccgggtggcttcatcaagcgtgag
ggccggccgagcgagaaggagatcctgacgagccgtcagatcgatcgcccgatccgtccg
ctgttcccggaggctttccggaacgagacacaggtggtggcgtttgtgtactcggccgac
aaggaaaacgatccggacgtgctgggcatcaacggcgcgagctgcgcgctgtcgctgtcg
gacattccgttccatgggccggtgggtgccgtgcgcatcggctacattgacgagcaatat
attgtgaacccgacctacagcgagcggctggtaagcctgctgaacatcatggtcgtcggc
acgaaggacggcatcgtgatggtggagtcgggtgcgaaggaggtctcggaagaggttgtg
ctcggggccattgagttcgcgcacgttgagatcaagaagatcgttgcgggcatcgaggag
ttggtgaagcttgcgggcaagccgaagcgtgcagtgactccgctggagaacgatacggag
tatgcggctgcgctgaaagcaaaggtcggcgataaacttgccgacgcactgaacacgaag
aagtatccgaagttcgagagctatgccaaggtcaaggagatcaaggacgagctgaagaag
gaactgccggcggatgacgccgcagcggccaagaagctgagcaagtattttgaaggcctg
cgcgagacgatcttccgcgagcaggtgctgaatgaccgcatccgtccggaccatcgcgcg
ttcgacgagatccgcaacatcacgatcgagacgggcgttctgcctcgtgtgcatggctcg
gcgctgtttacgcgcggtgagacgcaggcgttggtttcggccacgctgggcaccaccgac
gacgcacagcgaatggagagctacgaaggcgagcagaagcgccgcttcatgctgcactac
aacttcccgccgttctccgttggtgaggttgggcgcatgaccggtgtgggccgtcgcgag
attgggcacggagcgctggcgtggcgcgcgattgaggccgtgcttccgggtgaggatgag
tcgccgtacacgctgcgcgtggtgtcggacattctcgagtcgaacggatcgtcgtcgatg
gcgactgtttgcggtgcttcgctttcgctgatgcaggcaggcattcctctgaagggttct
gttgccggtgtggcgatgggcctggtgaaggaagaggacaagtatgcgatcctcaccgac
atcgcaggcgctgaagaccactacggcgatatggacttcaaggtcgccggcacgcgcaag
ggcatcacggcgctgcagatggacatcaagatcatgggcttgacggcgcagattctgcgc
gaggcactggagcaggcccgccagggccgcatgttcatcctggacaagatggatgcggtg
atctcgaaggcttcggaggagaagagcgcgttcgcgcctcgtatccacacgatccagatt
ccgaccgacaagatccgcgacctgatcgggccgggtggcaaggtgatccgcggcattgtg
gacgcaaccggtgtgaagattgacgtcgacgattcgggccgcgtgaatgtggcttcgagc
gatgcggacggtctcgcgaaggcgatccagatgatcagcgacattacggctgtacccgag
gtgggcaaaacgtatctcggcaaggttgttcgcctggccgagttcggcgcgttcgtcgag
atcttcccaggtaccgatggcctgctgcatgtgtccgagatcgcagagcatcgcgtgaag
gaagtgaaggacgagctgcgtgaaggtgaccaggtactggtgaaggtgctcgcgattgag
ggcaaccgcatcaagctgagccgcaaggctgtgctgcgtgaacagcgcgagaagctgggt
ctgccaccagtgccggagcagtccggtggtggtgagcgttcggaccgcggtgagcgtggt
ggtcgtgatcgcgaccgaggtggccgtgaccgcaatgagcgtggcgagcgtcctgtagct
ccgccgccgtctgaggctccgttggacgatgacgatgaggagtttgaggacgacgagttc
gagggtgatgaggatggtgaggatgagggtgacgaggctccggcaccggaggcagggaat
gctgccgctcctgctgccaacgggactccccgtccgcaaggccagcgtcgtggacgtcgc
cgccgtagccgccgtccgggtgctggtggtgcgccgcagggtgggaacgagtaa
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