Gordonia rubripertincta: GCWB2_14255
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Entry
GCWB2_14255 CDS
T05629
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00300
Lysine biosynthesis
gru00470
D-Amino acid metabolism
gru01100
Metabolic pathways
gru01110
Biosynthesis of secondary metabolites
gru01120
Microbial metabolism in diverse environments
gru01230
Biosynthesis of amino acids
Module
gru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCWB2_14255 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCWB2_14255 (dapF)
Enzymes [BR:
gru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GCWB2_14255 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ASR03642
UniProt:
A0A222TKD0
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All DBs
Position
complement(3128444..3129346)
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AA seq
300 aa
AA seq
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MRVSSPQTGLRFVKGHGTQNDFVVLADPAAEMSLDAEMVAALCDRQRGIGADGLLRVARA
GALVERGVLDALPDGVAADDWFMDYRNGDGSIAEMCGNGVRVFAHFVRATGLTDADTFTV
GSRAGARPVIIHSFDDVHAEVTVEMGIARLDGTSVVRIGDDIYPGAMVDVGNPHLACVVA
DLTADALAAVDFTAGVVIEADDFPNGANVELLTPPAEDVDGRLYARMRVFERGVGETRSC
GTGLVAATRAALDARGQDTGELRIGIPGGEVTVTVRTDGSTLRGPSMLVADGVLRPGWDR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtgagttcaccacagaccggtctgcgcttcgtcaagggtcacggcacccagaac
gatttcgtcgtgctcgccgacccggccgccgagatgtcgctcgacgccgagatggtcgcg
gctctgtgcgaccggcagcggggcatcggggccgacggcctgctgcgcgtcgcgcgagcg
ggtgcgctcgtcgaacgaggtgttctcgacgccctgccggacggtgtcgcggccgacgac
tggttcatggactaccgcaacggtgacggctcgatcgccgagatgtgcggcaacggcgtg
cgcgtcttcgcccacttcgtccgcgcgaccggactcaccgatgcggacaccttcacggtg
ggctcgcgcgccggagcccggccggtgatcatccactccttcgacgacgtgcatgccgag
gtcaccgtggagatgggcatcgcccgcctcgacggcacctcggtcgtccgcatcggcgac
gacatctacccgggtgcgatggtcgacgtcgggaacccgcacctggcgtgtgtggtggcc
gatctcaccgccgacgccctcgcggccgtcgacttcaccgccggcgtggtcatcgaggcc
gacgacttcccgaacggagccaacgtcgagctgctcaccccgccggccgaggacgtcgac
ggacgtctgtacgcgcggatgcgggtcttcgaacgcggcgtcggagagacccgcagctgt
ggaacaggcctggtcgcagccacgcgcgccgctctcgacgcgcgcgggcaggacaccggt
gagctgcgcatcggcatcccgggcggcgaggtcacggtgaccgttcggaccgacggctcg
accctgcgcggcccgtcgatgctggtcgccgatggcgtcctgcgacccggctgggaccgc
tga
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