Gordonia rubripertincta: GCWB2_20060
Help
Entry
GCWB2_20060 CDS
T05629
Symbol
lcfB19
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18687
HIP---CoA ligase [EC:
6.2.1.41
]
Organism
gru
Gordonia rubripertincta
Pathway
gru00984
Steroid degradation
gru01100
Metabolic pathways
gru01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
GCWB2_20060 (lcfB19)
Enzymes [BR:
gru01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.41 3-[(3aS,4S,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoate---CoA ligase
GCWB2_20060 (lcfB19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ASR04784
UniProt:
A0A222TNM1
LinkDB
All DBs
Position
4403691..4405274
Genome browser
AA seq
527 aa
AA seq
DB search
MAQTSRAGTLSVTTTPAALQRAARSWPDGIAIVDGQWLPSTDSQLELTWSQFHDAVRTFA
AALIASGIEAGDRVAVWSPNSFHWPIAALGVHYAGATLVPLNTRYTAGEAIEIVQRSAAR
GLVVSGEFLGADHAAELLRDHRGKLPDLVIRVPLSGGSPTPDGAVDWDDFLGRQTDEALT
EADRRAAAVSPDDISDILFTSGTTGKSKGVLATHRQTLNGSHGWGANAGLHPGDRYLMVN
PYFHTFGYKAGILPCVLFGVTMLPLAVYSPQQAMKLVSDQRATVFPGAPTIFQTILDDPK
RSDYDLSSLRLVVTGASIVPVVLIERLQTELGIETVITAYGLTEASGFVSTCTPDDDDET
VANTCGRAFEGMEIKLGDNGEVLARGDMVMLGYLDNPEATAETIDADGWLHTGDIGTIDE
HGNLKITDRLKDMYICGGFNVYPAEIEQTLARLDGVTESAVVGVPDDRLGEVGRAYLTVR
KDAELDEEKVIAFAKQHLANFKVPRSVVFVDEFPRNASGKILKRNLP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagacctcccgggcagggactctctccgtgacgacgacgccggccgcgttgcag
cgtgccgcacgcagctggcctgacggtatcgccatcgtcgacggccagtggctcccttcg
acagattcgcagctcgagctgacgtggtcgcagttccacgacgcggtgcgcaccttcgcc
gcggcgctcatcgcctcgggtatcgaggccggcgaccgggtggccgtctggtcaccgaac
agcttccactggccgatcgcggccctcggcgtccactacgccggcgcgacgctggtcccc
ctcaacacccgctacaccgcgggcgaggccatcgagatcgtccaacgctccgccgcgcgc
gggctcgtcgtgtcaggtgagttcctgggcgccgaccatgcggcggaacttctgcgcgac
catcgcggcaagctgccggatctggtgatccgggtgccgctgtcgggcgggtcgccgacc
cccgacggcgcggtggactgggacgacttcctcggacgccagaccgacgaggcgctgacc
gaggcggatcgtcgagccgccgccgtctcccccgacgacatctccgacatcctgttcacc
tccggcaccaccgggaagtccaagggcgtgttggcaacccaccgccagacgctcaacggg
tcgcacgggtggggcgccaacgcaggcctgcaccccggcgaccggtacctgatggtcaac
ccgtatttccacaccttcggctacaaggcgggcatcctgccgtgcgtgctgttcggcgtg
acgatgctgccgctggccgtgtactcaccgcagcaggcgatgaagctcgtctccgaccaa
cgcgccacggtcttccccggcgccccgaccatcttccagaccatcctcgacgacccgaag
cgctccgactacgacctctccagcctgcgactcgtggtcaccggggcgtcgatcgttccg
gtggtgctcatcgaacgactccagacagaactcggcatcgagaccgtgatcacggcctac
ggactgaccgaggccagcggtttcgtctcgacgtgcacgcccgatgacgatgacgagacc
gtcgccaacacctgtgggcgcgcgttcgagggcatggagatcaagctcggcgacaacggc
gaggtcctcgcccgcggcgacatggtgatgctcggatacctcgacaacccggaggccacc
gcagagaccatcgacgccgatggttggctgcacaccggcgacatcgggaccatcgacgag
cacggcaacctcaagatcaccgaccggctcaaggacatgtacatctgcggcggattcaac
gtctaccccgccgagatcgagcagaccctcgcccgcctcgacggtgttaccgagtcggcc
gtggtcggcgtccccgatgaccggctcggcgaggtcggccgcgcctacctgaccgtccgc
aaggacgccgaactcgacgaggagaaggtcatcgccttcgccaagcaacacctcgccaac
ttcaaggtgccccgctcggtggtgttcgtcgacgagttcccgcgcaacgcctcgggcaag
atcctcaagcgcaatctcccctag
DBGET
integrated database retrieval system
