Geotrypetes seraphini (Gaboon caecilian): 117345615
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Entry
117345615 CDS
T09159
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03250
Viral life cycle - HIV-1
gsh04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117345615 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117345615 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117345615 (SAMHD1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117345615 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
PDEase_I
SAM_Ste50p
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
117345615
NCBI-ProteinID:
XP_033770405
UniProt:
A0A6P8NMW0
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All DBs
Position
11:complement(137192750..137243167)
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AA seq
618 aa
AA seq
DB search
MVMDGEGRAKRARLAEERERTPEKEPGGQRPGAFLQWDTEDVCAFLRSQNLGKYTAAFRE
NQIEGRWLLHITDSHLKELGVSPLGDRLELLHCLQKLNQAFVETMQVTMKVFNDPIHGHI
ELHPLLIKIIDTPEFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGHLAGCLLRTLLERQ
PELQISQRDILCVQIAGLCHDLGHGPFSHMFDGRFIPLACPNKKWKHENASVRMFDHLVA
ANGLDQIMEQYGLLLPEDLVFIKEQIEGPITSEENLKWPYHGRPEEKSFLYEIVANKRNG
IDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVNEKKHICTRDKEVGNLYDMFHTRN
CLHRRAYQHKVGNIIETMITDAFLKADHHIWIEGTNKKQYTISTAMDDMVAYTKLTDNIY
QDILYSTCPKLAASREILQKVQCRQLYKYLGFTRPNKKIEKEEYDKLPADVAASTPQTTV
EVNLQAEDFIVDVIQMDYGMQEDNPIDNVRFYCKDDPKKAIKIRKDQVSQLLPEKFAEQF
IRVYCKKTDEKSLEAAKKYFVQWCIKRDFTKPQDGDVVAPELTPMKASWVDKDEKAQPSR
NHVECPKPRTKLFQNEHQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggacggcgagggccgggcgaagcgcgcgcggttggcggaggagcgcgagcgc
accccggagaaggagccgggcggccagaggccgggcgccttcctgcagtgggacacggag
gacgtgtgcgccttcctccgctcgcagaacttggggaagtatacggcggccttccgagaa
aatcaaatcgaagggagatggcttcttcacatcaccgattcacatctgaaagagttagga
gtgagccctttgggtgataggctggaattgcttcactgcctacagaagctgaaccaagct
tttgttgagacaatgcaggtgacaatgaaggtatttaacgaccctattcacggtcatatt
gaactgcatcctctcttgattaaaatcattgacacacctgagtttcagcgtctgcggtat
attaaacagctgggaggcacctattttgtatttccaggagcttctcataacagatttgaa
cactccattggtgttgggcacttggcaggatgtcttctgcgaacactacttgaaaggcaa
cctgaactgcagattagccaacgagatatcctttgtgttcagatagctggactttgccat
gatttgggtcatggccctttctcgcatatgtttgatgggagattcatacctcttgcatgc
ccaaacaaaaaatggaagcatgaaaatgcttctgttcggatgtttgatcatctggtggca
gccaatggactagatcaaatcatggagcaatatggtcttctcctgcctgaggatttggtt
tttataaaggagcaaatagaagggcccattacttcagaagaaaacttaaagtggccgtat
catggtcgacctgaagaaaaaagttttctttatgaaattgtggccaacaagaggaatgga
attgatgttgataaatgggattactttgctagggactgtcatcacttgggaatccagaac
aactttgactacaagcgctttctgaaatttgctcgtgtatgtgaagtaaatgaaaagaaa
catatctgtaccagagacaaggaagttggaaatttatacgatatgtttcacacacggaat
tgcctgcatcgtagagcataccagcataaagttggtaacatcattgagacaatgattaca
gatgccttcttgaaagcagatcatcatatttggatagagggaactaacaaaaagcaatat
acaatatctacagctatggatgacatggtggcctatacaaaacttacagacaacatttat
caagatattctgtattccacctgtcctaagctggcagcttcccgagagatcctacagaaa
gtccagtgccgtcagctgtacaagtatttgggattcacaaggccaaataaaaagatagaa
aaggaggaatatgataagttgccagctgatgttgctgcttccaccccacagacaactgta
gaggttaaccttcaggctgaggatttcatagttgatgttatacaaatggattatgggatg
caagaagacaatccaatcgataatgttcgtttctattgcaaagatgatcccaagaaagca
atcaagatccgcaaagatcaggtttcacaactgctgcccgagaaatttgcagagcagttt
attcgggtctactgcaagaaaacagatgagaagagtctggaagctgccaagaaatacttt
gtgcagtggtgtattaaaagggatttcacaaaaccacaggatggtgacgtggtggctcca
gaactgacaccaatgaaagccagctgggtggacaaggacgagaaggcccagccctctcga
aatcacgtagaatgcccaaaacccagaaccaaactctttcagaacgagcaccaatga
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