Geotrypetes seraphini (Gaboon caecilian): 117345658
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Entry
117345658 CDS
T09159
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117345658 (RBFOX1)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117345658 (RBFOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
117345658
NCBI-ProteinID:
XP_033770497
UniProt:
A0A6P8N4W6
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Position
11:complement(41418684..41939174)
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AA seq
474 aa
AA seq
DB search
MLQGLGLEQLLSFMEETGSRMVRQGNQEATAPPDTMAQPYASAQFAPPPQNGIPAEYTTP
HPHPAPDYTGQTTVPEHTLNMYPPAQAHSEQTATDTNAQTVSGTATQTDDAAQTDGQPQT
QSSESTENKTQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFE
NSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNDISAAFDSLNHLGMLER
LKQIGVEDCCYNSVKSWPGVPENGTFVPVHFPGWKLNPVVGAVYSPEFYAEEVHQEADSQ
SCVPGFPYPAATAAAAYRGAHLRGRGRTVYNAFRAAAPPPPIPAYGGCFQASARGLPPEI
SQSLHAGTYLNSVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDRVSKPLNFTLLFSH
PTNAQGDTHRTINQFVFVAADEISCNTSSVTDEFMLQTPTTTHLLQQPPTALVP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagggtctgggattagagcagctgctaagttttatggaggagacagggagcagg
atggtacggcagggtaatcaggaagctacagcacctcctgacacaatggcacaaccttat
gcctcagcccagtttgctccgcctcctcagaatggcatccccgcagaatatacaactcct
catccccatcctgctccagactacacaggacagacaacagtcccagagcacacattaaac
atgtaccctcctgctcaggcacattctgaacagacggccaccgacacaaatgcacagact
gtctctggcacagccacacagacagacgatgcagcacagactgatggtcaaccacagaca
cagtcctctgaaagtacagaaaacaaaacacagccgaaacgactgcacgtgtcaaatatt
cccttcagattccgagatccggatctcagacaaatgtttggtcaatttggtaaaatctta
gatgttgaaattatttttaatgaacggggctcaaagggatttggtttcgtaactttcgaa
aatagtgctgatgcggacagggcgagggagaaattacacggcacggtggtagagggccgt
aaaatagaggtaaataatgccacagcacgtgtaatgacaaataaaaagaccgtgaaccct
tacacgaatgatatctctgcagcatttgattcacttaatcatcttggcatgttggaaaga
ttaaaacagataggagtagaagactgctgctataactctgttaagtcatggccaggcgtt
cctgaaaacgggacatttgttccagtccactttcctggctggaagttaaatccagtagtg
ggtgcggtttatagtcctgaattctatgcagaagaagttcatcaagaggctgattcacaa
agctgtgtgcctggctttccttaccccgctgcaactgcagctgctgcttacaggggagca
catctaagaggccggggtcgtacagtgtacaatgcatttcgtgcagcagctccccctcct
ccgattccagcctatggcggatgcttccaagccagtgccaggggattaccacctgaaatt
tcacagagcttacatgcgggaacctatttgaatagtgttgtttaccaggatggattttat
ggtgcagatatttatggtggttatgcggcataccggtatgcacagcctgctactgccact
gctgcagcctacagtgacagggtctcaaaaccactcaacttcacattgctgttctctcac
cctacgaatgcccaaggggacactcatagaaccataaatcaattcgtcttcgttgcagca
gatgaaatttcttgtaacacctcttcagttacggacgagtttatgctgcagacccctacc
accacacacttgctccagcagccacctacggcgttggtgccatga
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