Geotrypetes seraphini (Gaboon caecilian): 117346402
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Entry
117346402 CDS
T09159
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03022
Basal transcription factors
gsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117346402 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
117346402 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117346402 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117346402 (GTF2H4)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117346402 (GTF2H4)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117346402 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
fvmJAB_N
Motif
Other DBs
NCBI-GeneID:
117346402
NCBI-ProteinID:
XP_033771793
UniProt:
A0A6P8NMG5
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All DBs
Position
12:117983335..118002770
Genome browser
AA seq
455 aa
AA seq
DB search
MKLNRVQLKCKNLHEFLQELTPAILDRLYNHPATCLAVFRELPGLAKNYVMRMLFLDQPL
PQATVGLWVKKENQKEHEENTQVLSGLRLWHTQQLPGGLQGLILNPIFKENLRVALLGGG
KAWADDTSILGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMK
SEPGEPPCISSAGFQFLLLDTSSQLWYFMLQYLKSAESRGMDLVEILSFLFQLSFSTLGK
DYSVEGMGDSLLTFLQHLREFGLVFQRKRKSRRFYPTRLAINLASGISGTSVDIHNQGFI
IMETNYRIYAYTESELQIALIALFSEMLYRFPNLVVAHLTRESIQQAIANGITAEQVIHF
LRTRAHPVMLKQTPVLPPTITDQIRLWELEKDRLCFSEGVLYNQFLSQVDFELLRNYARD
LGVLVFENPSKRLMVVTPGGHADVKRFWKRQKQSS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacagagtgcagttaaagtgcaagaacttacatgagtttctgcaggagctg
accccagctatcctcgaccggctctataaccacccagccacctgcctggctgtcttcaga
gaactgccgggattggccaagaattatgtgatgcgaatgctcttcctggaccagcccctc
ccacaggccacagtgggcttgtgggtgaagaaagagaaccagaaggagcatgaggagaat
acccaagttctgtctggcctgcgactctggcatacccagcagctaccaggggggctgcag
gggctcatcctaaaccctatcttcaaagaaaatctccgtgtggcactgttaggaggggga
aaggcgtgggcggacgacaccagtattctgggtccagacaagcacgcccgagacgtgccc
tcgctggataagtatgctgaagagagatgggaggtgatcctccatttcatggtaggctct
cccagtgctgccgtgagccaggacttagcgcagctcctgatccaagctggccttatgaag
agtgagcccggggagcctccctgcatctcctcggccggctttcagttcctgctcctggac
acatcctcccagctctggtacttcatgttacagtacctcaagtctgctgagtctcgtggg
atggacctggtggaaattctctccttcctcttccagctgagcttctccacccttggaaag
gattactcagtagaaggaatgggggactctttgctcactttcctgcagcaccttagagag
tttggcctggtcttccagagaaagagaaagtcacgacggttctaccccacccgactggcc
attaatctggcatctggcatctccggtacctcggtggacatccacaaccagggcttcata
atcatggaaactaactataggatctacgcctacacagagtcggagctgcagatcgcattg
atcgccctcttttcggagatgctgtatcgcttccccaatctggtggtggctcacttgacg
agggaaagtattcagcaagccatcgccaatgggatcacagctgagcaggtgatccacttc
ctgagaacccgggcccatccagtaatgctgaagcagaccccagtgcttccccccaccatc
acggaccagatccgcctctgggagctggagaaagaccgactatgcttttcagaaggtgtt
ttgtataatcagttcctatctcaggtagactttgagctcttgaggaattatgctcgagac
ctgggggtcctggtctttgagaaccccagcaagaggttgatggtggtgactcccgggggt
catgccgacgtcaaacgcttctggaagcgccagaagcagagttcctga
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