Geotrypetes seraphini (Gaboon caecilian): 117346409
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Entry
117346409 CDS
T09159
Symbol
WDR78
Name
(RefSeq) WD repeat-containing protein 78 isoform X1
KO
K24723
dynein axonemal intermediate chain 4
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117346409 (WDR78)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gsh03037
]
117346409 (WDR78)
04812 Cytoskeleton proteins [BR:
gsh04812
]
117346409 (WDR78)
Cilium and associated proteins [BR:
gsh03037
]
Motile cilia and associated proteins
Dynein arm
117346409 (WDR78)
Cytoskeleton proteins [BR:
gsh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117346409 (WDR78)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
117346409
NCBI-ProteinID:
XP_033771807
UniProt:
A0A6P8N8B5
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All DBs
Position
12:45158335..45345608
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AA seq
791 aa
AA seq
DB search
MSSHFSSVTKSKKRLGLSRTGVYGKKTLIGSGSLNQSRMNYSVMIGASSRKSLKSLPLPA
EGKAMDKGSLAAGKHSVQVFDDQGKNVTPRCLFCPESGTTQSKQTKIFTSQESSLVNTSE
ILSSLSLYQTGANASFAGPFTRSTFGSSSFTKSSISTAESVTDEIEVPTFRRDTAFSISD
IHIRREDLREFPIERDLNKVVDVYLTDTEMIWFLDMSPLFVSMDSEEAEIVKLKNQAYAD
LCRNRADNDQYIARMMQTFNGAAKNKEVQCDKIIMEDAAAIATSWDLFDSFNIVEETDAE
ALERHSTATSLISSKSNVSKDYEGTMSLSSMGRDDSYSSSIMDVEKIILTRRTEDVHQDT
EKILKSQKFHQDLFFMERVIIENIFQSKLAAYRQLPILEEQVAAEESTDTVISSLDRLWS
FTCDLTKGHNVSSTAWNKMNPDLLAVGYGQFEFTDQRGGLACCWSLKNTMWPERIYQCES
GVTALDFSSANPNLLAVGMYNGVVAVYNVQKNRDTPVLDCSDSAGKHTSPVWQLKWTEQD
KVITGDEKGEALVSISADGRIAKWHIRKGLDCSDLMKLKRTGNDKYRKSTSEKERKAEAF
ISRQAPGMCFDFHPKETNIYLAGTDEGQIHKCSCSYNEQFLDTYKAHKGPVYKIAWNPFC
HDVFLSCSADWNIYLWRQDILKPILSFSASTEAVHDIMWSPTSALVFGAVNDSRVEIWDL
SVNILDPVIISFANPGVKLTTVLFTKEANCVLIGDSDGQVSVYEVKNVSGYKTDQVEALN
AIIRTTLASQL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtcatttcagcagcgtgactaaatcgaagaaacgactcgggctttctaggaca
ggagtgtatggaaagaagacattgattggatctggttctttgaaccaaagcaggatgaat
tatagcgttatgattggagcatctagtcgaaaaagcctaaaaagcctacctttgccagct
gagggtaaggccatggataaaggatctcttgcagctgggaagcactctgtacaggttttt
gatgaccaagggaaaaatgtaacacctcggtgtcttttttgtccagaatcgggaaccacc
cagagtaaacaaaccaaaatatttacttcccaggagtcttctctggtcaatacatcagaa
attctgtccagcctttctctgtatcagactggagcaaatgctagttttgctggtccattt
acaaggtcaacatttggaagcagcagttttactaaatcaagtatatctactgcagagtcg
gtgaccgatgaaatagaagtaccaacatttagacgagatacagcatttagcatatctgat
atacacataagaagagaagatttgcgagaatttccgattgaaagagacttaaataaggta
gtggatgtataccttacagacacagaaatgatctggttcctggatatgtctcctctgttt
gtatccatggatagtgaagaagctgaaatagtcaagcttaaaaaccaggcctatgcagat
ctttgtagaaacagagctgacaatgatcagtacattgcaagaatgatgcagacctttaat
ggagcagcaaaaaataaagaagtgcaatgtgataaaatcatcatggaagatgcagctgca
attgctacttcctgggacctatttgattcattcaacatagtggaagaaacagacgcagaa
gcacttgaaagacatagcacagcaacaagtctgattagcagtaaatcgaacgtaagcaaa
gactatgaaggaaccatgtctttgagttcaatggggagagatgatagttattcaagttct
atcatggatgtagaaaaaattattctaactcgaagaacagaagatgtacatcaagatact
gaaaaaatactgaaatctcaaaaatttcatcaagatttatttttcatggagagagttatt
atagaaaatatttttcagtcaaagttggcagcatatcggcaattacccattctggaagaa
caagtggctgctgaagaaagcactgacacagtgatatcaagcttggatcgtctgtggtct
ttcacatgcgatttgacaaaagggcacaacgtgagcagcactgcgtggaacaaaatgaac
ccagatcttttggctgttggttatggccagtttgagtttactgatcagagaggagggctt
gcttgctgctggtcactaaaaaacactatgtggccagaacgtatttatcagtgtgaaagt
ggggttactgcactggatttctcatcagcaaatccaaatcttttggctgttggaatgtat
aatggtgttgtagcagtttataatgtgcaaaaaaatagggatacaccagtcctggactgc
agtgatagtgctggcaaacacacaagccctgtatggcaactgaaatggacagaacaagac
aaagtcataactggagatgaaaaaggggaggcattagtttctatatctgcagatggaaga
atagcaaagtggcatatcagaaaaggactggattgtagtgatctgatgaaacttaaacga
actgggaatgataaatacaggaaatcaacaagtgaaaaagaaagaaaagctgaagccttt
atttctcgacaggcacctggaatgtgttttgattttcatccaaaggaaacaaatatatac
ttggctggaactgatgaaggacagatacacaaatgctcctgttcatataatgaacaattc
ttagacacctataaagcacacaagggccctgtttacaagatagcttggaatccattttgt
catgatgtatttttaagctgttctgcagactggaatatttatttgtggcgtcaggatata
ctaaaaccaatactaagcttttctgccagtactgaagctgtgcatgatatcatgtggtct
ccgacatcagctttagtatttggagcagtaaatgacagtagagtggaaatttgggacctt
agtgtgaatatcttggaccctgtgattatcagctttgctaaccctggagttaagctgaca
acggtattgtttacaaaagaagcaaactgtgttctgattggggacagtgatggacaagtc
agtgtttatgaagtgaaaaatgtttctggttataaaactgatcaggtggaggctttaaat
gccataattaggacaacattggccagtcagctgtag
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integrated database retrieval system
