Geotrypetes seraphini (Gaboon caecilian): 117346589
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Entry
117346589 CDS
T09159
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117346589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117346589
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117346589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
117346589
NCBI-ProteinID:
XP_033772300
UniProt:
A0A6P8NTX4
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All DBs
Position
12:complement(118144935..118149721)
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AA seq
1063 aa
AA seq
DB search
MGSYLCRSEAPAAAARPRPSPALAARPSPIKRLSLGAESPSRYALPRRRYPIRQPQHAAL
GSLPAGPWDGGRRKSVLASRNGGAARSPVTVKIAPPDAGLARSRLIARLLAPLPTSAPDP
CARETVLNAIKERRRRGGGGEEEDAAAAAAAGGQESKRRRRDSSGSGQSAFESLAAGGAP
AALVPKPGSLKRAWNAQPPDDPLRKRSRASSSSSLGSARGIPSSARNAIASSYSSSRGLR
PSRARSVAASSSPSSSSRSRTPEKEEEPQPPPSLPPAKAAAPQSPPGRDITETPVLKKPV
SFRNSSPEGGGKRRRRIPLLPSWRGDPLALPPPPQLGRSVTAEDLDAEKRLAIQRLNKAL
EEKSHDTPSSPIETTAPGPSLAFTPATTAALASPTSSAGSNPLLDSLTHLQKPPGSTEPA
GGATQMPPLSSSAFSAASLTVGPSSSAAVLASPAVSSVPSSSELASDTSLRMPAIHPSET
PDAKLPSASSPKRGILFGMLSGTTPNSTIVATPPAGTAAAPTFKHIFGAPLKVENAASPL
VSLSEACSTPPPSSVMGAASSTTFKPIFGTLTATTNSSTVISPFTFNQTPVTSVTPAATS
TTSSSMHSGLISAVSTTSSAFGTITTQRTSSSIDSSAKPSFTFGLSSVPSTTTSTTTGAH
SFQFGALSNPTASTATGFGAGFQFNKQPVATTISSPASQATSIFDQTPSLGTKAAFSIFG
STPAAAAATTTTSSSQPTLTFGSSSSAFSALPFGTSANAPPPYPGITSQPTFSNSIADAQ
PVGTKPATDSLNFSTSGAPFSFGMSTVQSAFGNAAQPHFPENSSQSSFSASSTQPTFGNT
TSAFGTVALTTAPSFGSASTQTTTSSASGPLFGGTPAFTFGASNQSGSSSSTFNIGAQNS
NVSSATSGFGFGAGQNQPANATAAFRTGVQSSSATPVMNRFSFGMGQGGSGSSTGTFGSP
ALQSNAMSNQNQSALFSFGTPVAAENKLSFGGTSIPTFGQNTSATPVAGGLSFGTSSTPG
SGFATPGPFGSSTPAFSIGLGSKPPGTRQRLQARRQHVRKKQL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggcagttacctgtgcaggtccgaggccccggccgccgccgccaggccgcggccgtct
cccgccctcgccgccagaccctcgccgatcaagcggctctcgttgggcgcggagtccccg
agccgctacgcgctccctcggcggcgctacccgatccgtcagccgcagcatgccgcgctg
ggctccctcccggcggggccgtgggacggcggccggcggaagagcgtgctggcgtcgagg
aacggcggcgcggcgcgcagccccgtgacggtgaagatcgcgcccccggacgcgggcctc
gcgcgctcgcggctgatcgcgcggctcctcgcgccgctgcccacgagcgcgcccgacccg
tgcgcgagggagacggtgctgaacgccatcaaggagcgccggcgacgcggaggcggcggc
gaggaggaagacgcggcggcggcggcggccgccggcggccaagagagcaagaggcggcgg
cgcgacagcagcggcagcggccagtccgccttcgagtcgctggccgccggcggggccccg
gccgccctcgtgcccaagcccggctccttgaagcgcgcgtggaacgcgcagccgcccgac
gaccctctgcgcaagaggtcgcgcgcgtcctccagcagctcgctcggcagcgcccggggc
attcccagctcggcgcgcaacgccatcgccagctcgtacagctccagccggggcttgcgg
ccgtcgcgggcgcggagcgtggccgcgtcctccagtccgtcgtcgtcgtcgcgctctcgg
acgcccgagaaagaagaggagccgcagccgcccccgtcgctccccccggccaaagcggct
gccccgcagtctcctcccggaagggacatcaccgagacgcctgtgctgaagaagccggtt
tctttcaggaactcgtccccggagggtggagggaagcgtaggcgcagaatcccactgctc
ccctcgtggcggggggacccgctcgccttgccgcccccgccccagctgggacgtagtgtg
acagcggaagacttggacgcggagaagagactggccatccagaggctcaacaaggcccta
gaagagaagagccatgatacaccaagctccccaattgaaaccacagcccctggaccttcc
ttggcattcacgcctgccaccaccgctgcactggcctcgccaacctcctcagctggctcc
aacccactgctggacagtctgacccacttacaaaagcctccagggagcacagagcccgct
gggggagcaactcaaatgccgccactctcatccagcgctttttctgcggcctccctcacc
gttgggccgtcaagttctgcggccgtgctcgcatctcctgcggtttcttcggtcccttcg
tcctctgagcttgccagcgacaccagcctgcggatgcccgctattcacccaagtgagacg
cccgacgccaagcttccttccgcttcatccccaaaacgtggcattctttttgggatgctg
agtgggacgacgcccaactctacaattgtcgcaacgccgccagccggcacagcagccgcc
ccgaccttcaagcacatctttggcgccccactgaaagtggaaaatgctgcctccccgtta
gttagcttgtctgaagcatgttcaacgccacctcccagttctgtaatgggggctgcctca
agcactacgttcaaaccaatttttgggaccttaactgctactaccaatagctccaccgtg
atctcacctttcacatttaatcagacacctgtgacaagtgttactcctgcagcgacatcc
acaacaagcagctccatgcactctggacttattagtgctgtctctaccactagttctgca
tttggcaccatcaccacacagagaaccagcagcagcattgactcttccgccaagccatcc
tttacctttggactctccagcgtacctagtactaccacgtccaccaccactggagcacat
tctttccaatttggagccctttcaaaccccactgcctctacagcaacaggatttggtgct
ggatttcagtttaacaaacaacccgtggcaactaccatctcttccccagcctctcaggct
acatccatctttgaccagacaccctctttaggtaccaaggctgcttttagcatttttgga
agcaccccagcagcagcagcagcaacaacaaccacaagcagcagccagcctactttgaca
tttggttcttcctcttctgcattcagtgcattgccgtttggtactagtgcaaatgctcca
cctccctaccctggtataactagccagcccacttttagcaacagtattgcagatgctcaa
ccagtgggcaccaagcctgccactgactctttaaacttttcgaccagcggtgccccattt
agttttggtatgtctactgttcagtcagcctttggaaatgctgcccaaccccatttcccg
gagaatagttcccagtcatccttcagtgccagtagcactcagccaacatttggcaatacc
acatctgcctttggtacagttgctctaactacagctcccagttttggttctgcaagcact
cagaccacaaccagtagtgcaagtggacccctttttggaggaactcctgctttcactttt
ggggcatcaaatcagtcgggtagtagcagctctacatttaacattggagcacagaacagc
aacgtatcttctgcaacaagcggattcggttttggagcaggacagaaccagcctgcaaat
gcaacggccgcatttagaactggagtgcagagtagcagtgcgacccctgtgatgaacagg
ttcagttttggaatgggacaaggtgggtctggaagctcaacaggcacctttggttcccct
gccctacagtcaaacgccatgagcaatcagaatcagagtgcactgttctcatttggcaca
cctgttgcagcagagaacaagctttcctttggagggacttccatacctacttttggccag
aatacctcggcaacaccagtggcaggtggcctatcctttgggacttctagcactcctggc
tcaggctttgccacaccaggtccttttggatcttcaactcctgcattttccatcggtctg
ggatctaaaccacctggaacacggcagcgactgcaggcacggagacagcatgtccgcaaa
aagcaactttaa
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