Geotrypetes seraphini (Gaboon caecilian): 117348601
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Entry
117348601 CDS
T09159
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117348601 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117348601 (NEIL1)
Enzymes [BR:
gsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
117348601 (NEIL1)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117348601 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
117348601
NCBI-ProteinID:
XP_033776798
UniProt:
A0A6P8PMQ0
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All DBs
Position
14:50482034..50522569
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AA seq
468 aa
AA seq
DB search
MPEGPELHLASRYINRVCAGLIFSGKVEKSDVSKNPEVPFENAKYLISAVSRGKEVKLNL
TPVKEEKKSGRLQGTKEPIDIVFRFGMSGHFMLSPATELPKHAHLRFYTKDSPRQALCFV
DMRRFGRWEAPGTWQPDRGPCVMLEYEKFRENVLRNLAEKAFDRPICEALLNQKYFNGVG
NYLRAEILHRLKIPPFVKARTVLEPLLQQDQDAELTLSKKVKIKKENPDLLELCHSVPME
AIQLGPEGFYPIRREDFSIYEKWLQCYFVPGMKTLRDSSGRTIWFQGEAGPLAPKAAKSK
TKRRGMKAKPETPSPKIIKTETEQDSKNAKTQADGTGRGKDKKGKLGRMKSKKSEIKAGQ
NANENVKKQTNLKAKKRKLQPQDLSESNPPVTKRVERSRQRLESQDSSGNLPATKKRQRG
RSVVDTPSWTQDSSKKNCPAVERKSQRSAAKRTGSNSKAQRPRRGHVK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaggcccggagttacatttggccagccgttacatcaacagggtgtgtgcaggg
cttatcttctcgggaaaggtggagaaatcagatgtgagcaagaacccagaggtaccattt
gagaatgcaaagtacctgatctctgcagtttctcgtggcaaagaggtgaagctgaacctt
acccctgtcaaggaagagaagaagagtggaaggctgcaaggcaccaaggagcccatagat
atagtcttccgctttggtatgtcagggcactttatgctaagccctgcaactgagctacct
aaacatgcccacttgcgcttttacaccaaggacagcccacgacaggcgctctgctttgtg
gatatgcgacgctttgggagatgggaagcccctggcacatggcagcctgatcgtgggcca
tgtgtgatgttggaatatgaaaaattcagggagaacgttctgaggaacctggctgaaaag
gcctttgaccggcccatctgtgaagcgctgctcaaccagaagtacttcaacggcgttggc
aactacctccgagctgaaattctgcataggttaaagatcccaccctttgtgaaggccagg
acagtgcttgagcccctcctgcaacaggatcaggatgcagagttaaccctgagcaaaaag
gtgaagataaagaaggagaatccagacctactggagctgtgccactctgtacccatggaa
gctattcagctggggccggaagggttttacccgatacgcagagaggatttctctatctat
gaaaagtggttgcagtgttattttgtgcctggaatgaagactctgcgagacagtagcggc
aggacaatatggttccagggtgaagctggaccactggccccaaaagctgcaaaatctaaa
acgaaacgcagaggtatgaaagcaaagcctgagactcccagccccaagataataaagact
gagacagaacaagactccaagaatgccaaaacccaggctgatggcacagggagaggaaaa
gacaagaagggcaagttgggcaggatgaagtctaaaaagtctgagatcaaagctggacaa
aatgctaatgaaaacgtcaagaaacaaacaaacctcaaagctaagaagagaaagctccaa
ccccaagacctttctgaaagtaatcctccagttacaaagagagtagagcggtcgaggcaa
agactagagagccaggattcctctggaaatcttccagctacgaaaaagcggcagcgagga
aggagtgtggtggatactccttcctggacacaggattcctccaaaaagaattgtccagca
gtagagaggaagagtcagagaagtgctgccaaaagaaccggatcaaacagcaaagctcag
agaccccgacgagggcacgtcaaatag
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