Geotrypetes seraphini (Gaboon caecilian): 117348870
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Entry
117348870 CDS
T09159
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C-like
KO
K14316
nuclear pore complex protein Nup121
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117348870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117348870
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117348870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
117348870
NCBI-ProteinID:
XP_033777342
UniProt:
A0A6P8P1E3
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All DBs
Position
15:complement(66584164..66644974)
Genome browser
AA seq
1039 aa
AA seq
DB search
MTNRYMIPRRRYPIRQPQYSALGSLPLVQWDGYQRKNVLSSRNSCMVHSPVTVKIAPLDV
SITRSQLIDQLLSPVPTPSPKIIPDPCARETVLNAIKDCRKRGVEEEDQITAGGQENKRR
RHDSSGSGQSAFESLAASGAPAFLIPKPGSLKRGLNPQYAEDPLNKRSRTSSSSSLNSAR
GILSSVRNAITSSYSSTQGFQQKWKKSVQSSSALSSLSSLPSQTSKKPAKEDELQQSYTS
PPVKAAVTESPPGKEIIETPVLKRPNSLRNSSSESGGKRKRKIPLLPSWRGDPLTLPPPP
QLGRRVTAEDLDAEKRMAIQRLNKALEEKSSDIPSSSVETTPPGSSFSFIPATTSTSVLA
LPTSSAGSNPLLESLKKIQNSPTSTEPAGEATQMLPLSSSIFSSAFNAASGTCSLTVVPS
SSESVLTSPSVSLVPSSSELPSNTTSLQIPSLLPSETPDAKLPSPKRGILFGMLSGTTPN
SAFVTTSPASTAAIPTFKHIFGTPLKVENVVSPLVSLSEACSTPPPSSVTGAASSTTFKP
IFGTLTAATNSSTVISPFTFNQTPVTRVGVTPAATSTTCSSIHSGLISAVSTTSSAFGTT
TTQRSSSSSIDSSAKPSFTFGLSSVPSTTPATTTGAHSFQFGALSNPTASPATGFGAGFQ
FNKQPVAATISSTASQATSIFDQTPSSATKAAFSIFGSISTAAATTTSNSQPALTFGSSS
SAFSALPFGTSANAPPPYPGITSQPTFSNSIADAQPVGIKPATESLNFSASGTPFSFGMS
TVQSAFGNAAQPRFPENNSQSSFTTSNTRPTFGNTTSAFFGTVAPTTAASFGSASTRTTT
SSTGGPLFGGTSAFTFGTSNQSGSSSSAFNIGAQNSNVSSATSGFSFGAGQNQPANATAT
FGIGVQSSSATPVMNRFSFGMGQSRSGSTAVAFGSPVLQSNALSNQNQSAPLSFGTPLAT
ENKLSFGGTSTPTFGQNTSATPVAGGLSFGTSSTPGSGFVTPGPFGSSTPAFSIGLGSKP
PGTRQRLQARRQHVRKKQL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcgctatatgattcctcgacggcgatatccgattcgtcaaccacagtattct
gcactgggatccctccctctagtgcagtgggatgggtatcagagaaaaaatgtgctttct
tcaagaaactcctgcatggtacatagtcctgtgacggtgaagatagcacctctggatgtc
agcattactcgttcacagcttatcgatcagctcctttctccagttccgacaccctcgcca
aaaatcataccggatccatgtgcaagggagactgtgctgaatgcaatcaaggactgccgg
aaaaggggggttgaggaggaagaccaaattactgccggtggccaagaaaataagagaagg
cgtcatgacagcagtggtagtgggcagtctgcctttgaatcgctggcagccagtggagct
cccgcttttcttataccaaagcctggatccttaaagagagggttgaacccacagtatgca
gaggatcctctgaacaaaaggtctcgcacatcctccagcagctctctcaatagtgccaga
ggaattctcagttctgtacggaatgctatcaccagttcctatagctctacccagggcttc
caacagaagtggaagaaaagtgttcagagttcctctgcattgtccagtctatcatctttg
ccctctcaaacatccaagaagccagcaaaagaagatgaacttcagcaaagctatacgtct
cctcctgtgaaagcagctgtaacagaatctcctccaggaaaggaaataatagagactcct
gtgctgaagagaccaaattctttaaggaactcatcctcagagagtggaggaaaacgtaaa
cgcaaaatcccacttctaccctcatggcgaggagatccactcactttgccacctccaccc
caactcggacgtagggtgacagcagaagacttggatgcagagaagagaatggccatccag
cggctcaataaggccttggaagagaagagcagtgatataccaagctcctctgttgaaact
acaccccctggatcttccttctcattcatacctgcaaccactagtacatctgtactggca
ttgcccacttcctcagctggctccaacccactgctggagagtttgaaaaaaatacaaaat
tctccaactagcacagagcctgctggtgaagccactcaaatgctgccactatcatcaagc
attttttcttcagcttttaatgcagcctcgggaacatgctccctcacagttgtaccatca
agttctgagtctgtgctcacatctccttcagtttctttggtcccttcttcctctgaactt
cccagcaacaccaccagcctgcagataccttctcttctcccaagtgagacacccgacgcc
aagcttccttccccaaaacgtggtatcctttttggtatgctgagtgggacaacacccaac
tctgcctttgtcacaacatcaccagccagcacagcagccataccaaccttcaaacacata
tttggcacaccactgaaagtggaaaatgttgtctccccgttagttagcttgtctgaagca
tgttcaacaccacctcccagttctgtaactggggctgcctcaagcactacattcaaacca
atttttgggaccttaactgctgccaccaatagctccacagtgatatcacctttcacattt
aatcagacacctgtgacacgtgtcggtgttactcctgcagcgacatccacaacatgcagc
tcgatacactctgggcttattagtgctgtctctaccactagttctgcatttggcaccacc
accacacagagaagcagcagtagcagcattgactcttccgccaagccgtcctttaccttt
ggactctccagcgtacctagtaccaccccagccaccaccactggagctcattcattccag
ttcggagccctttcaaaccccactgcctctccagcaacaggatttggtgctggatttcag
tttaacaaacaacccgtggctgctaccatctcttccacagcctctcaggctacatccatc
tttgaccagacaccctcttcagctaccaaggctgcgtttagcatttttggaagcatctcg
acagcagcagcaacaaccacaagcaacagccagcctgctttgacatttggttcttcctct
tctgcattcagtgcattgccgtttggtacgagtgcaaatgctccacctccctaccctggt
ataaccagccagcccacttttagcaacagtattgcagatgctcaaccagtgggcatcaag
cctgccactgagtctttaaacttttctgccagcggcaccccatttagttttggtatgtct
actgttcagtcggcctttggaaatgctgcccaaccccgttttccggagaataattctcag
tcatccttcactactagtaacactcggccaacatttggcaataccacatctgccttcttt
ggtacagttgctccaacaacagctgccagttttggttctgcaagcactcggaccacaacc
agtagtacaggtggacccctttttggaggaacaagtgcgttcacttttgggacctcaaat
cagtcgggtagtagcagctctgcatttaacattggagcacagaacagcaacgtatcttct
gccacaagcggattcagttttggagcaggacagaaccagccggcaaatgcaacagccaca
tttggaattggagtacagagtagtagtgcaacccctgtgatgaacaggttcagttttgga
atgggacaaagtaggtctggaagcacagcagtcgcctttggttcccctgtcctccagtca
aacgccctgagcaatcagaatcagagtgcaccgctctcatttggcacacctcttgcaaca
gagaacaagctttcctttggagggacttccacacctacttttggccagaatacctcagca
acaccagtggcaggtggcctatcttttgggacttctagcactcctggctcaggctttgtc
acaccaggtccttttggatcttcaacgcctgccttttccattggtctgggatctaaacca
cctggaacacggcagcgactgcaagcacggagacagcatgtccgcaaaaagcaactttaa
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