Geotrypetes seraphini (Gaboon caecilian): 117348894
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Entry
117348894 CDS
T09159
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
gsh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117348894 (UBE4B)
04120 Ubiquitin mediated proteolysis
117348894 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117348894 (UBE4B)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117348894 (UBE4B)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
U-box type E3
117348894 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
117348894
NCBI-ProteinID:
XP_033777401
UniProt:
A0A6P8PPG6
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Position
15:25542179..25679488
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AA seq
1345 aa
AA seq
DB search
MEELSADEIRRRRLARLGGGPSSQPTTPLTSPQRETPPGPPPAAAAAPAPGPSTSLGLSV
HPITPATSPIGASGGAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVACEKSL
SQVDVDSGIENMEVEESDRREKRSLSDKEPVSGSEVSEEQALQLVCKIFRVSWKDRDRDV
IFLSSLSTQFKQNPKEVFSSFKDLISQILMEVLMMSTQSRDENPFSSLTATSQPIAATVR
SGDRTLTLNPASSLGTSPMLCNVGSFGASSLSSLYGISPVPAVGFLSGMPSLSPSSSPET
PTSPSPALSISPHVIAAQPSSSRYHPYTLTQHGSFPPTHSPRSTNTCMPPSSPGPQLQAI
SPQEIPTNSASQRPSSIGAPLFSSSPTALNGRLSLLSRIPSSASVSENPFALLFLPLSDV
SGDNSGEEGSEEDFPCVQYGCSSNTTGGTSACDPGSDRFTIETCKETEMLNYLSECFDRV
GIEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGALTQPRSVQQQSLLVPYMLCRNL
PFGFIQELVRTTHQDEEVFKQIFSPIVQGLALAAKECSLDSDNFKYPLMALGELCEIKFG
KTHPVCSLLASLPSWLPKPLSPATGRELQRLSYLGAFFSLSVFAEDDTKVVEKYFSGPAI
TLENTRVVSQSLQHYLESARQDQFKILHNVLLNGETREAALGYMAAVINANMKKAQLQTD
DRLVSTDGFMLNFLWVLQQLSSKIKLETVDPMYIFHPKCRITVPNDETRVKAMMEDVVSW
VAELNGDPSLFSEPKFPTECFFLTLHTHHLAILPSCRRYIRRLRAIRELNRTVEELKNNE
SQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLSFYGMVIQLILHI
LDPCFPNITLPLSLDVPKMFAALPEFYVEDIAEFLFFIVQYSPQVLFEPCTQDIVTFLVV
LLCNQNYIRNPYLVAKLVEVMFVTNPAIQPRTQKFFEMIENHPLSTKLLVPSLMKFYTDV
EHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTTFL
LDESLESLKRIHEMQEEMKNKAHWDQLPQEQQQAQQSQLAQDERVSRSYLALATETVDMF
HILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQLTD
IYLHLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFQLLAEKVEEIVAK
NARAEMDYSDAPDEFRDPLMDTLMSDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTLTE
SMLEPVPELKERIHAWMRDKHNSDQ
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgacgacggcgtcttgctcggcttggaggtgga
ccatcttcacaacctactaccccacttacatctccacaaagagaaacaccacctggaccc
ccccctgcagcagcagcagcacctgctccaggtccatctaccagtcttggtctaagtgtt
catcccataactcctgctacatctcccattggagcttcaggaggtgcccatcgaagccag
agcagtgaaggcgtcagctctctcagcagctcaccatccaacagtctggagacacaatct
cagtctctctcccgctcccagagcatggatattgacagtgtggcttgtgaaaaaagcctg
tctcaggtggatgtggactcagggattgaaaatatggaagttgaagagagcgaccgtaga
gaaaagcggagcctgtccgacaaggagcctgtctcgggatctgaagtgtctgaggagcag
gctctacagctggtatgtaagatatttcgtgtctcttggaaggacagagatagagatgtc
atcttcctttcctcactttcaacacaattcaagcagaatccaaaagaagtcttctctagt
tttaaggacctgatcagccagattttaatggaggttttgatgatgtccacccagtcaaga
gatgaaaaccccttttccagcctgactgcaacgtctcagccaattgcagcaactgtgcgg
tcaggtgacaggactctgacactgaaccctgcttccagcctgggcacaagtcccatgctc
tgtaatgttggttcctttggtgccagctctctatccagtctgtatgggattagtccagtt
cctgctgttggtttcttgagtggtatgccatctttatccccatcatccagtcctgagacc
cccacatccccttctcctgctctttctatcagtcctcatgtcattgcagcccagccctca
tcatccagataccatccatatacactcactcaacatgggagctttccacccacccacagc
cccaggtccaccaacacttgcatgccacccagttcaccaggtccacagttacaggctatc
agccctcaagaaataccaaccaattctgccagccagagaccctccagcattggagctcct
ttgttttcttcttcacctactgcattgaatgggcgcctctctttgctaagcaggattccc
tctagtgctagtgtgtctgagaatcctttcgccctcctcttcctgcccctttctgatgtc
tctggagacaacagtggtgaggaaggctcagaagaggattttccatgtgtgcagtatggg
tgcagctcaaatacaactggtgggaccagtgcctgtgatcccggcagtgataggttcacc
attgagacctgcaaagaaactgagatgctcaactacctcagcgaatgctttgacagggtg
ggcatagaagaaagaaaagcaccaaagatgtgcagccagccagctgttagccaactgctg
agcaacatccggtcacagtgtatttcccatgctgctctagtattacagggtgctctcacc
cagcccaggtcagtgcaacagcagtctctcctagtaccttatatgctttgcaggaacctt
ccatttggattcattcaagaacttgttagaacaacccatcaggatgaagaagtgtttaag
cagatttttagtcctatagtacaaggactagctctggctgccaaagagtgctctcttgat
agtgacaacttcaaatatcctcttatggctttgggtgagctatgtgaaatcaagtttggg
aaaacacatcctgtgtgttctttgcttgcatctttgccctcatggttacccaagccttta
agccctgccactggccgggagctgcagcgactatcttacctaggagctttcttcagcctc
tctgtatttgcagaagatgatactaaagtagtggaaaaatatttctctgggccagctatt
actctagaaaacactcgagtcgttagccagtccttgcagcattatctggaatcggcccgg
caagatcagttcaagattctgcacaatgttcttctgaatggtgagacccgagaggcagca
cttggctacatggcagctgtcatcaatgccaacatgaagaaagcacagctacagacggat
gatcgtctagtgtccacagacggatttatgctcaactttctgtgggtactgcagcaactg
agctccaagatcaagctggagactgttgaccccatgtacatattccatcccaaatgtcgc
atcactgtccccaacgatgagacaagagtgaaggccatgatggaagatgtggttagctgg
gtggctgagctgaatggggatcccagtcttttctctgagccaaagttccctacagaatgc
tttttcctcacgttgcacacgcaccaccttgccattctgcctagctgtcgacgttacatc
cgcagactgcgtgctatccgagaattgaacaggactgtggaggaattgaagaataatgaa
agtcaatggaaagattcacccctggcaaccagacatcgagagatgctgaaacggtgcaaa
acccagctgaagaagttagttcgctgcaaggcctgtgctgatgctggcttgttagatgag
aattttctgaggcggtgccttagtttctatggcatggtgatccagctgattcttcacatc
cttgacccctgctttcccaatatcacactgcctttaagcttggatgtccccaaaatgttt
gcagcactgccagaattttatgtagaagatatagctgagtttttattttttattgtacaa
tattctcctcaggttctctttgagccatgtactcaagacatcgtcaccttcttggtggtg
ctgctatgcaatcagaactacatccgaaacccttacctagtggccaagctggttgaggtc
atgtttgtaacgaaccccgccattcagcctcgcacacagaaattcttcgaaatgattgag
aatcatccactttcaactaagctcctggtcccttctctgatgaaattttatacagatgtg
gagcacactggagccacaagcgagttctatgataaatttacaattcgttatcatataagc
actatttttaaaagcctctggcagaacatagcacatcatggtacattcatggaggaattc
aactccgggaagcagtttgtccggtacattaatatgttaataaatgataccacatttctg
cttgatgagagtctggaatctctgaagcggatccatgaaatgcaagaagaaatgaagaac
aaggcacactgggaccagctaccccaggagcagcagcaggcccagcaatcacaactggct
caagatgagcgtgtttctcgttcctatcttgctctggccacagagactgttgatatgttt
cacatactcacaaaacaggttcagaagccgtttttgagaccggagcttggacctcgttta
gctgcaatgttaaactttaaccttcagcagttatgtggacccaaatgtcgtgacctgaaa
gtagagaaccctgaaaaatacgggtttgaaccaaagaagctattggatcagttgacagac
atttacctgcacttagactgtgctcgctttgcgaaggccatcgctgatgaccagcgctct
tatagcaaagaactcttcgaggaagttatttctaagatgcgcaaagcaggaatcaagtct
acgatagcaatagaaaagttccagctactggctgagaaggtagaggaaatagtagcaaag
aatgcacgggcagagatggattacagtgatgcacctgatgagttcagagatccattgatg
gacacactgatgtctgatcctgtgaggcttccatctggaactattatggatcgctccatt
atcctaaggcacctgctgaactcatctacagaccccttcaaccgacagaccctcacagaa
agcatgctggagccagtacctgaacttaaggaaaggatacatgcctggatgagggacaag
cacaatagtgaccagtga
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