Geotrypetes seraphini (Gaboon caecilian): 117349191
Help
Entry
117349191 CDS
T09159
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gsh03036
]
117349191 (CHD5)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117349191 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117349191
NCBI-ProteinID:
XP_033778242
UniProt:
A0A6P8NPV0
LinkDB
All DBs
Position
15:13205502..13449563
Genome browser
AA seq
1979 aa
AA seq
DB search
MQRLCLFCKKKGTAFEFAISGGEQREDEDGALQRLEEFFPEEQANAQKKKKYKKSKEGKT
SRTKRKKKEGSDEEVSENEEEMEEKSESEGSDYSPNKKKKKKLKEKREKKSKRKKKEEEE
DDNEDGGVKEPKTSAQLMQEWGLDNVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPLRGSSAAAAAAAVAAAVETVTITSPYSISSQQPLQALPIR
KAKTKEGKGPGVRKKAKGAKEVKKKGRGKKMVNLKFRFGGMASKRKKVSSSEEDEREESD
FDSASINSSSVRSDISAGLIKRGKRGRKKKRVEEGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEDEDEEEVGEEEEEEDDHMEFC
RICKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLTGKVQRILHWVWRE
PPPPFSSGSPADCDTTAPPPKPLEGIPEREFFVKWAGLSYWHCSWIKELQLELYHTVMFR
NYQRKNDMDDPPPFDYGSGDEDGKCEKRKNKDPQYAKMEEKYYRYGIKPEWMVIHRIMNH
SFDKKGDAHYLIKWKDLPYDQCTWEIDDINIPDYESLKQSYWNHRELMLGEDGRPPKSLS
KKVRKLSDEKLQKPPLTPNVDPTVKFDKQPWYINATGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRAIIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLV
RSSGKLMLLQKMLKKLKDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMSKQELDDILKFGTEEL
FKDDVEDHHCGTLTVYRRTGDNKDVEDSSVIHYDDDAISKLLDRNQDATDDTELQNMNEY
LSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKR
IRKQVNYNDTTQEDQGTMSLKWQDELSDNQSEYSIGSEDEDEDFEERPEGQSELRGGRRQ
SKRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRD
LRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQ
EFEHVNGKYSTPDMIPERPESKKSTEVVSSDPNTPVPASPAPLQTCTSTLSEKNESQPGF
LEDKEQTDIKPKKPVETQVLTNPDKVDSEEQQEAIEGKEKPTESCKEDIEKLEPASDQLL
KAEVVEERDKGSEKLEFNVNQAKLEEKEPKSVEEKKPDEKDQAENQQNGEKEMKEEEEEG
RKDEKNNRFKFMFNIADGGFTELHTLWQNEERAATSSGKIYDIWHRRHDYWLLAGIVTHG
YARWQDIQNDPRYLILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYL
NMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMK
ADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRGGDPTAQQGSFGSNQMYNNNFGPNFR
GPGPGGIVNYSQMPLGPYVTATSNGPSSSHLDKKVTDSLRDCISLERKGKFNDIICIED
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggttgtgcttattttgtaaaaaaaaagggacagcatttgagttcgctattagt
ggaggagagcaaagagaggatgaagacggggccctgcaaagactggaggaattctttccc
gaggagcaagccaacgcgcagaagaaaaagaaatacaaaaaatcgaaagaaggaaagacg
tccagaaccaagaggaaaaagaaagagggaagtgatgaggaagtgtcagaaaatgaagag
gaaatggaggaaaaatcagagagtgaaggaagtgactattcccccaataaaaagaagaag
aaaaagcttaaggaaaagagagagaaaaaatctaaacgaaaaaagaaagaggaagaagag
gacgataatgaagatggaggtgtaaaggaacccaaaacgtcagctcagttgatgcaagaa
tggggtctggacaatgtagattatatcttctcagaagaggattaccatactctgactaat
tacaaggcttttagtcagtttctcaggcccctgattgccaaaaagaatcccaaaatcccc
atgtctaagatgatgacagtgctgggcgccaagtggcgggagtttagcgccaataatccg
ctgagaggaagttcggctgctgcggctgcggccgcagttgcggccgctgtggagaccgtc
accatcacatccccttattccatcagctcccagcagcctctgcaagctctcccaatacga
aaagccaaaactaaggaaggcaaaggcccaggtgtaaggaagaaagccaagggagcaaag
gaggtaaaaaaaaagggcagagggaagaagatggtcaacctgaaattccgatttggagga
atggctagcaaaaggaaaaaggtctcctcgagcgaggaggatgagcgcgaagagtcagat
ttcgacagcgctagcattaatagctcttcggtccgctctgacatctctgctggtttgata
aagagaggaaagagaggaaggaaaaaaaagagagttgaagaaggagatggctacgagacc
gatcatcaggattactgcgaggtttgccagcaagggggggagatcattttgtgcgacacc
tgccctcgtgcctatcaccttgtttgcctggatcctgagcttgagaaagctccagagggc
aagtggagctgtccgcactgtgagaaagaaggcatccaatgggaacccaaggaagaagat
gaggatgaggaagaagtaggtgaagaggaagaggaggaagatgatcatatggagttttgc
cgcatctgtaaagatgggggagagctgttgtgttgtgacacctgtccatcgtcatatcat
ttgcactgtctcaatccacctttgcccgaaataccaaatggcgaatggctatgccctcgt
tgtacgtgtccgcctttaactgggaaagtacaacgaattctgcactgggtgtggagggag
ccccctcccccattctcatctgggtcacctgctgattgtgataccactgcccctccaccg
aaaccactggagggtattccagagagagaattctttgtgaaatgggcaggactctcgtac
tggcattgttcatggatcaaagagctgcaactggagttgtatcacactgtgatgttcagg
aactaccaaagaaaaaatgacatggatgacccgccgccatttgactatggctccggagac
gaggacggcaaatgtgagaagagaaaaaacaaagacccccaatatgcaaagatggaggag
aagtactatcgctatggcattaaaccggagtggatggtgatccacaggatcatgaaccac
agttttgataaaaagggagacgcccattacttgatcaagtggaaagatctgccatatgac
cagtgtacttgggagatcgatgacatcaatattccagactatgaaagcttgaaacagtct
tactggaaccacagggagctgatgttgggagaagatggaagacccccaaagagtctgagc
aagaaagtcagaaagctcagtgacgaaaaattgcagaagccaccattaacccccaatgtt
gatcctaccgttaagtttgacaagcagccttggtacatcaatgcaacgggaggaactttg
catccttaccagctagaaggcctaaattggctgcggttttcctgggctcaaggaacggat
actattcttgcagatgagatggggttggggaaaacagtccagaccattgtgtttctctac
tccttgtacaaagagggtcactcaaagggcccctacttggtcagcgcccccttgtccacc
atcatcaactgggaacgagagtttgagatgtgggcacccgatttctatgttgtaacgtat
accggagataaggagagtagagcaataatcagagaaaacgagttctcgttcgaagacaac
gccatccgtagcgggaagaaggtcttcaggatgaaaaaagaagctcagattaaattccat
gtcctgctcacctcttatgaactcatcaccatcgatcaggccatcctggggtccatagag
tgggcgtgtcttgtggtggatgaagctcacaggctgaagaacaaccagtcaaaattcttt
agggtattgaatagctataagattgactataagctgctgttaactggaacgccactgcag
aataatctggaagagcttttccatcttctgaatttcctgacgcccgagaggtttaacaac
ctggatgggttcctggaggaatttgcagacatttcaaaggaagaccagattaagaaactg
cacgacctactgggaccccacatgctgcggcgactgaaggccgatgtcttcaagaacatg
cctgcaaagaccgaactcatcgttcgagtggagctcagtcagatgcaaaagaagtactac
aaatttatactaactaggaattttgaagcattgaactcgaaaggtggtgggaaccaggtg
tccttgcttaacatcatgatggacctgaaaaaatgctgcaatcacccctatcttttccct
gttgctgctgtggaggctccggtcttgccaaatggatcgtatgatggcaactcgttggtc
agatcgtctgggaaattgatgcttttacagaagatgctaaagaaactcaaggatgggggc
cacagagttctaattttctctcagatgacaaaaatgttggatttacttgaagactttctg
gaatatgaaggctacaagtatgagaggattgatggaggcatcacaggaggattgcggcaa
gaggctattgacaggtttaatgctcctggtgcccagcagttttgctttcttctatccacc
cgggctggtggtctggggattaacttggccacagctgacacagtcattatttatgactct
gactggaacccccacaatgatatccaggccttcagcagagctcatcgcattggccagaac
aaaaaggtgatgatttaccgattcgtcacgcgagcctcggtggaagagaggatcacacag
gtggcgaagaggaagatgatgctcacgcatctggtagtccgtccgggtctgggctccaag
tctggatctatgagcaagcaagagctggatgacattttgaaatttgggaccgaggagctc
tttaaagatgatgttgaagaccatcactgtggcaccctgactgtgtacagaagaactggt
gataataaagatgtcgaggacagtagcgtaattcattatgatgatgatgctatctctaag
ctactagatcggaaccaggatgccacggacgacacagagctccagaatatgaacgagtat
ctcagctcatttaaagtggcccaatacgttgtcagagaagaagatggagtggaggaggtt
gaacgagagattataaaacaagaggagaatgtagatcctgactactgggaaaaactgttg
cgtcatcactatgaacaacaacaagaagatcttgccaggaaccttgggaaaggcaaaaga
atacgcaaacaggtcaactacaatgacacaacccaagaggatcaaggtactatgtctctg
aagtggcaggatgagctctctgacaaccagtcagaatactccatcggctcagaagacgaa
gacgaagactttgaggaaagacctgaagggcagagtgagttgagaggcggtagaaggcaa
tctaaaaggcaattgaaaagtgaccgggacaaaccacttcctcctctactggcaagagtt
ggcgggaatattgaggttcttggattcaatgctagacaacgcaaggcattcttgaacgcc
atcatgcgctggggcatgcctccccaggatgcctttaattcccactggctggttcgagac
ctgagaggaaaaagtgagaaagagtttagggcttacgtgtcgctgtttatgagacatcta
tgtgaacctggagctgatggcgcagaaacctttgcagacggggtccctcgggagggactt
tcccggcagcatgtcctcaccaggatcggagtgatgtcccttgttcggaagaaggttcag
gagtttgaacatgtgaatggaaaatacagcacccccgacatgattcctgagagaccagaa
agcaaaaagtccactgaggttgtttcctctgaccccaacacacctgttcctgccagtccg
gctccacttcagacctgcacttctacattgtcagagaaaaatgaaagtcagcctgggttt
ctggaagataaagagcagacagacattaaacccaaaaagcctgtggaaacccaggtgtta
acaaatcctgacaaggtggacagtgaggaacagcaagaagccatagagggcaaagagaaa
ccaaccgaaagctgcaaagaagacattgaaaagctggaacctgcttcagatcagctgctg
aaagctgaagtagttgaagaaagagacaaggggtcagaaaagctggagttcaatgtaaat
caggcaaaacttgaagagaaggagcccaagtcagtggaagaaaagaaaccggatgaaaaa
gaccaagcagagaaccagcaaaatggagagaaagagatgaaggaagaagaggaagagggg
agaaaagatgagaagaacaacagatttaaattcatgttcaacattgctgatggcggcttt
acagagcttcatacgttatggcagaacgaagagagagctgccacctcctcgggaaagatc
tatgacatctggcacagaagacacgattactggctccttgccggcattgtcacccatggt
tatgcccgctggcaggacatacagaacgatcctcgctatcttatcctaaacgagcccttc
aagtctgagatacacaaaggaaactatcttgagatgaaaaacaagtttctggcacggaga
ttcaagctgttggaacaagcattagtaatagaggaacagctccggagggctgcatatctc
aacatgacccaggaccccaaccacccagcgatggccctcaacgctcgtctggcggaagtg
gaatgccttgccgagagccaccagcacctctccaaagaatccctggcgggcaacaagcct
gccaatgccgtcttgcacaaagttctgaaccagttagaggagctgctgagtgatatgaag
gcagatgttacccggttaccctccatgctgtccaggataccgccagttgccgcacggctt
cagatgtcagagcggagtatcttgagccggctgacaaaccgcggaggtgacccaacagct
cagcagggttcttttggctccaatcagatgtacaacaataactttggcccaaatttccga
ggccctggaccaggagggattgtcaactacagtcagatgcctctggggccctacgtgact
gccacttcgaacggtccttcctcgagccacctggataaaaaagtcaccgattcgctgaga
gattgtatctccttggaacgcaaaggaaaatttaatgacatcatctgtattgaagattaa
DBGET
integrated database retrieval system
