Geotrypetes seraphini (Gaboon caecilian): 117350640
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Entry
117350640 CDS
T09159
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00310
Lysine degradation
gsh00514
Other types of O-glycan biosynthesis
gsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117350640 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117350640 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gsh01003
]
117350640 (COLGALT1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
117350640 (COLGALT1)
Glycosyltransferases [BR:
gsh01003
]
O-Glycan biosynthesis
O-linked Gal type
117350640 (COLGALT1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
117350640
NCBI-ProteinID:
XP_033780957
UniProt:
A0A6P8NWZ0
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Position
16:50417133..50434579
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AA seq
608 aa
AA seq
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MARARPPPLLLVLLLLAGAAAGYFPEERWSPESALQAPPVLLALLARNAAHSLPTVLGCI
ERLRYPPHRLGLWVATDHNIDNTTAILREWLVNVQDKYHYVEWRPQEEARSYPDEEGPKH
WSNSRYEHVMKLRQAALNSAREMWADYILFVDADNLLTNPDILSLLIAENKTVVAPMLES
RAAYSNFWCGMTSQGYYRRTPAYIPIRKLDRRGCFAVPMVHSTFLIDLRKEASQDLAFHP
PHPDYTWAFDDIIVFAFSCKQAEVQMFLCNKEVYGFLPVPLRSHSSLRDETDSFLHVELE
VMVRNPPVPPSQYIYIPPKVPDKMGLDEVFLINLKRRKDRRDRMLRALYKQQIACKIVNA
VDGKAMNATQVDAMGIKMLPGYKDPYHGRPLTKGELGCFLSHHSIWKEIVERELEWSLVF
EDDLRFEVFFKRRLLNLVHEVKEEKLDWDLIYIGRKRMQVDYPEKAVPRIRNLVEADYSY
WTLGYLISLQGARKLLAAEPLSKMLPVDEYLPVMYNKHPVDKYMEHFESRTLKAFSAEPL
LVFPTHYTGDDGYVSDTETSVLWNNDTQKTDWDRAKSQKMREQQALRNEAKNSDVVQSPL
DSTARDEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggctcggccgccgccgcttctccttgtcctcctgctgctggcgggcgccgcg
gccggctacttcccggaggagcgctggagccccgagtctgccctgcaggcgccgcccgtc
ctgctggccctgctggcgcgcaacgccgctcactccttgcccaccgtgctgggctgcatc
gagaggctgcgctaccccccgcaccggctcggcctctgggtggcgacggaccataatatt
gacaacactacagcgatactgagagagtggttagttaacgtacaggacaagtatcactac
gtggaatggaggccacaggaggaagctaggtcttacccagatgaggaagggcccaagcac
tggtccaactctcgttatgagcacgtgatgaagctgagacaggcggcgctgaactctgcc
agggagatgtgggccgactacatcctgtttgtggatgcggacaatctcctcaccaacccg
gacatcctgagcctgctgatagcagagaataagacggtggtggcccccatgctggagtcc
agagccgcttattccaacttctggtgtggcatgacttcccagggttactacagacgcact
ccggcctacatccccattcgtaagctggaccggcgcggctgcttcgccgtccccatggta
cattccacgttcctgatcgatctgcggaaggaagcgtcccaggacctggctttccatccc
ccgcatcccgactacacctgggctttcgatgacatcattgtgtttgcgttctcttgcaag
caggcagaagtccagatgtttctgtgcaacaaggaggtatacggcttcttaccggttccg
ctgcgatctcatagcagcctgcgtgatgagacagacagcttccttcacgtggagctggag
gttatggttcgaaaccctccagtgccgccgtcccagtatatttacatcccacccaaggtt
cctgacaagatggggctggacgaggtgttcctgattaacttgaaacgacgcaaggatcgg
cgagatcggatgctgagggcgctatacaaacagcagatcgcttgtaaaatcgtgaatgcc
gtggacggcaaagccatgaacgccactcaggtggatgccatggggattaaaatgctacca
ggctacaaagacccgtaccacggacgcccccttaccaaaggagagctgggctgcttcctg
agccaccacagtatatggaaagagattgtggagcgggagctggaatggtcccttgtcttc
gaggatgacctgcggttcgaggtcttctttaagcgtcggctgctgaatttagtgcatgag
gtgaaggaggaaaagctggactgggacttgatttacatcggccggaagcgcatgcaagtg
gattacccggagaaggcggtgccccgcatccgaaacctggtggaagcggattactcctac
tggacgctgggctacttgatctcgctgcagggagcccgcaagctgctggccgccgagccg
ctcagcaaaatgctacctgttgacgaatatcttccagtcatgtataacaagcacccagtg
gataagtacatggagcacttcgagagccggacgctgaaggctttctcggcagaaccgttg
ctggtcttccccacccactacaccggggacgacggttatgtcagcgacaccgagacctct
gtcctctggaacaatgacacgcaaaagacggactgggaccgggccaaatcgcagaagatg
cgggaacagcaggcactgcgaaacgaggccaagaactcggacgtggttcagtcccctctg
gacagcaccgctagagatgaactatga
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