Geotrypetes seraphini (Gaboon caecilian): 117351969
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Entry
117351969 CDS
T09159
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117351969 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117351969 (USP47)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117351969 (USP47)
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117351969 (USP47)
Ubiquitin system [BR:
gsh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117351969 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117351969
NCBI-ProteinID:
XP_033783777
UniProt:
A0A6P8P3V6
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All DBs
Position
19:complement(16248060..16362596)
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AA seq
1381 aa
AA seq
DB search
MVPGEEKNHLVPREGMFWSCRQSIFDEMKKKFSQIENAADELRVLCIIQDITNCKTVNER
ITLNLPASTPLKQLFEDVASKAGYVNGTFDLVWASCVNAAAMSPLDQMSNKSLLDAGFES
GKKNFLHLTDKDGEQPQLLLDESGTADSSGLDSTQEKFIGPLPREGSVGCTSDYISQNYS
YSSILSKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQ
LQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQAD
LINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFVQPEI
LDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEEL
DMSPFIDIEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESSSNTERI
LLKSGTEKNSSPYELFSVMVHSGSAAGGHYYACIKSFHDDQWYSFNDQHVSRITQEDIKK
TYGGSSGSRGYYSSAFASSTNAYMLIYRLKNPAKNAKFLEVSDFPDHIKHLVQKEKELEE
QEKRQREIERDTYKIKLFCMHPVKQIMMENKLEVHKDKSMKEAVEIAYKIMGLEDVVPLN
CCRLVKYDEFHDYLERSYEEEEDQPMGILLGGVKSSYMFDLLLETRRHDQVFQSYKPGEV
MVRVHVVDLKTETISAPINVRAYLNQTIMEFKQLVSKAVDLPAETMRIVLERCYNDLRLL
NVLNKTLKAEGFFRSNKIFVESSDSLDHQMAFTDSHLWKLLDRHANTIRLYVSLPEQSPG
PQYTRTVCLKAGGDSGHTEEGCERVKASIGSNKSVEAILEESTEKLKTLSLQQQQEGGNG
DSSKSTDASDFENIDSPGNELDYSSSVDTRELENRIPTSDPENFQAEERSDSDVNNDRST
SSVDSDILSSSHSSDTLCNADSAHMPLANGLDSHSITSSRRSKANEAKKETWDTAEEDSG
TDSEYDESSKSRGEIQYMYFKAEPYGAAAGSGEGQKWLMVHVDKRITLAAFKQQLEPYVG
VLSSQFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVFQLLIND
PEPCKFLLDAVFSKGMTVRQSKEELLPQLREQCGLDLSIDRFRLRKKTWKNPGTIFLDYH
VYEEDINISTNWEVFLEVLDEVEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSADE
LKEKLNELSGIPLENIEFAKGRGTFPCDISILEIHQELEWNPKVSALNVWPLYICDDGAV
IFYRDKTEELTQLTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLSQ
D
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaagaaccacctcgtacccagagagggtatgttttggagttgc
agacaaagtatctttgatgaaatgaagaagaaattttcacagatagaaaatgctgctgat
gaactgcgagtgctgtgtataatacaagatattacaaattgcaaaacagtgaatgaacgt
atcaccctaaatctgccagcttctactccactgaagcagctgtttgaggatgtggccagc
aaagcgggctatgtgaatggaacttttgatctagtgtgggcaagctgtgttaatgctgct
gctatgtcgccattggatcaaatgagcaacaagtctctactagatgctggctttgagtcg
ggtaaaaaaaattttctgcatctgacggataaagatggtgaacaacctcagctattgttg
gatgaatctggtactgcagacagtagtggccttgatagtactcaagagaagttcataggg
ccgctcccaagagaaggttctgttggctgcaccagtgattatatcagccagaactactcc
tattcatccatcttaagtaaatctgacaccggttacgtggggttagtaaatcaagcaatg
acatgttatttgaacagcctcttgcaaacactcttcatgactcctgagtttaggaatgca
ttatacaagtgggaatttgaggaatctgaagaagatcccgtgaccagcatcccttaccag
ctacaaaggctgtttgttctattgcagaccagtaagaagcgagccattgaaacaacagat
gttacacgaagctttggctgggacagcagcgaagcttggcagcagcatgatgttcaggag
ctttgcagggtcatgtttgatgcattagaacagaaatggaagcaaactgagcaggctgat
cttattaaccagctctatcaaggcaaactgaaggattatgtaagatgtctagaatgtggt
tatgagagctggagaatcgacacttatcttgatattccactggttattagaccctatggt
tccagccaggcatttgctagtgtggaggaggcattgcatgcctttgttcagcctgaaatt
ctcgatggtcccaatcaatacttttgtgaacgctgcaagaagaaatgtgatgctagaaag
ggccttagatttttgcactttccatatctcctgactcttcagctgaagaggtttgatttt
gattacaccacaatgcacaggataaaactgaatgatcgcatgacttttccagaagagctg
gacatgagtcctttcattgatattgaagatgagaagtctccccagactgagagttgcact
gatagtggagccgagaatgaaggtagttgtcacagtgatcagatgagcaatgacttttcc
aatgatgatggagttgatgaaggaatctgtcttgaaagcagtagcaacactgaaaggatc
ttattaaaatctggcactgaaaagaattcctcaccatatgaacttttttcagttatggtt
cattcaggaagtgctgctgggggccattactatgcctgcattaaatcctttcatgatgat
cagtggtacagttttaatgatcagcatgttagcaggataactcaagaagatattaagaaa
acttatggtggatcttcaggaagccgaggctactattctagtgcctttgcaagctctaca
aatgcatacatgctcatttacaggctgaagaatccagcaaaaaatgcaaagtttcttgaa
gtgagtgactttccggaccatattaagcacttggtacagaaagaaaaggagttggaagag
caggaaaagaggcagcgggaaattgaacgtgatacctacaagataaaattgttttgcatg
catcctgtgaaacagataatgatggagaataagttggaggtccacaaggataagtcaatg
aaggaggctgttgaaatagcttataagataatgggcttggaagacgtagtacctctgaat
tgctgtcgtcttgtcaagtatgatgagtttcatgattacctggagcgctcttatgaagaa
gaggaagatcagccaatggggattttacttggaggagtgaagtcatcctacatgtttgat
ttgctattagaaacccgaagacatgatcaggttttccagtcctacaagcctggagaagtg
atggttagagtgcatgtggttgacctaaaaacagagactatatctgcccctatcaatgtg
cgagcttacctgaatcaaactatcatggaattcaaacaactcgtatcaaaggcagtagat
cttccagcggagacaatgcgaatagtgctggaacgctgttacaatgatttgcgacttctt
aatgtgctcaataaaaccttgaaagctgaaggctttttcaggagcaataaaatatttgtc
gagagttcagactccttagatcaccagatggcttttacagactctcatttatggaagctt
ttagatcgtcatgccaacaccatcagactttatgtttcattacctgaacagtctccagga
cctcagtatactaggacagtttgcctgaaagctggtggcgattcaggccacacggaggaa
ggctgtgaaagagtgaaagcttctataggtagtaataaatctgtggaagctatattggaa
gaaagcactgaaaaacttaagactctgtccctgcagcaacagcaggaggggggtaatgga
gatagcagtaagagcacagatgccagtgactttgagaacattgattcacctgggaatgag
ttggactattcatcctcagtagataccagagaactggaaaacagaattccaacctctgat
cctgaaaatttccaggcagaggagcgctcggactccgatgtgaataatgacaggagtaca
agttcagtcgatagcgacatcctgagctccagtcacagcagcgacaccctgtgcaatgcg
gacagtgcccacatgcctttggcgaacgggctggactctcacagcatcacgagcagtagg
agatcaaaagcaaatgaggcaaagaaggagacttgggatacggctgaagaggattctgga
accgacagtgaatatgacgagagcagcaagagcagaggagagatccagtatatgtacttc
aaggctgaaccttacggtgctgctgcaggctcgggggaaggacaaaaatggttgatggta
catgttgacaaaagaattacattggctgccttcaaacaacagctggagccctatgtgggg
gttttatcttcacagttcaaagtcttccgagtctatgccagcaatcaggagtttgagagt
gttcgcttgaatgagacactctcatctttttcagatgataataaaatcactattcggctt
ggaagagctctgaagaaaggggaataccgagtcaaagtattccagcttctaataaatgat
ccagagccttgcaagtttctcttggatgcagttttttcaaaaggaatgactgtgcgccag
tcaaaagaagagctgctacctcagctcagggagcagtgtgggttagacctcagcatagac
aggtttcgtctaagaaagaaaacatggaagaaccctggcactatatttcttgattaccat
gtctatgaggaagatattaacatttcaaccaattgggaggtctttttagaagtacttgat
gaggtggaaaaaatgaagtccatgtcgcagcttgctgttctgtcccgacggtggagaccc
tctgaaatgaagctagatcctttccaagaagttgtgctagaaagcagcagtgctgatgaa
ctgaaagaaaagcttaatgaattaagtggaattcctctggaaaacatagaatttgcaaag
ggtagaggaacatttccatgtgacatttcaatacttgagatccaccaagaattggaatgg
aatcctaaagtgtcggcattgaatgtctggcctctctatatctgtgatgatggagctgtt
atattttacagggataaaactgaagaattaacacaactcacagatgaacagagaaatgaa
ttgatgaaaaaggaaagcagccggctgcagaagactggacaccgggtgacatactcccct
cggaaagaaaaggcattaaaaatttatctagacggagcaccaaacaaagatttaagccaa
gactga
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integrated database retrieval system
