Geotrypetes seraphini (Gaboon caecilian): 117353834
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Entry
117353834 CDS
T09159
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04140
Autophagy - animal
gsh04148
Efferocytosis
gsh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117353834 (VPS41)
04148 Efferocytosis
117353834 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117353834 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117353834 (VPS41)
Membrane trafficking [BR:
gsh04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
117353834 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
ANAPC4_WD40
Vps39_2
Vps39_1
TPR_7
TPR_19
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117353834
NCBI-ProteinID:
XP_033786133
UniProt:
A0A6P8QFN6
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All DBs
Position
2:complement(333882768..334284476)
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AA seq
851 aa
AA seq
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MNVEVVKSSEESTDDSEEDESEDEPKLKYERLSNGVTDILQQDAASCMTVHEKFLALGTH
NGKVYLLDIQGNVTQKFEISTVKINQISLDESGENVGICCEDGKVQVFGLYSREGFHEIF
DCPIKIVAVHPQFGKSSCKQFVTGGNKLLLYERTWLNRWKTFVLHEGEGNITNIKWRGNL
IAWANSMGVKILDIVTRQRITNVPRDDTSLRPDMYPCSLCWKDNLTLIIGWGNSVKICSV
KERHASEIRDLPSRYVEIVSQFDEEFYISGLAPLSDQLVILFYVKEVSEKAGKVCCARPR
LDIIQPLPESYEEISSDALTVRGFQENECRDYRLEYSEGESLFYITSPRDIVMAKERDQD
DHIDWLLEKKKYEEALMAAEISHKTIKRHKVLDIGLSYINHLVEKGDCELAARKCQKILG
KNMKLWEDEVYRFKKIGQLKAISQYLPRGDLRLRPAIYEMILDEFLKSDYEGFSTLIREW
PGDLYNNMTIVQAVLDHLKKDPQNRTLLKTLAELYTYDQRYDRALEIYLTLRHKDVFQLI
HKHNLFSSIRDKIVLLMEFDAEKAVDMLLDNEDKISTEKVVEELENRPELQHLYLHKLFK
RDHHKGQKFHEKQISLYAEYDRLNLLPFLRDSTHCPLEKALEICQQRNFVEETVFLLSRM
GNSRRALQMIMEELHNVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTHVDP
ILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVSDSLSLLKKMHRTQMRGV
LVDEESICESCLSPVLPSDAAKPFNVTVFHCRHMFHKECLPIPSMMSTLQFCNICSAKHR
GPGSAILEMKK
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagaggtagtaaaatctagtgaagagtctacagatgactcagaggaagatgag
agtgaagatgagcccaagctaaaatatgagaggctttctaatggagtgactgacatccta
caacaggatgcggctagttgcatgacagtgcatgagaagtttttagcactgggcacgcac
aatggcaaggtctatttgcttgacatccagggcaatgtgacccaaaaatttgaaattagc
acagtgaagataaatcagatcagtttggatgaaagtggggagaatgtgggcatatgctgt
gaagatggcaaggtgcaggtgtttggactctattcaagagaaggatttcatgaaatcttt
gactgtcctattaagattgttgctgttcatcctcagtttggaaaatccagctgtaagcag
tttgtaacaggaggaaataagcttctattgtatgagaggacctggctcaacagatggaag
acctttgttttacacgaaggtgaaggcaacataacgaatataaaatggagggggaactta
attgcatgggctaatagcatgggagtgaagattcttgacatagtcacaaggcagagaatt
acaaacgtgccgcgagatgacaccagcctccgtccagacatgtatccctgcagcctctgc
tggaaagacaacttaacactgattattggctggggaaattctgtaaagatatgttcagtg
aaggagcgccatgccagtgaaatcagagacctgcctagtcgctacgttgaaatagtttca
caatttgatgaggaattctacattagtggacttgcacctctctctgaccagcttgtaatt
ctgttttatgtgaaggaggtgtctgagaaagcaggtaaggtgtgctgtgctagacctcgc
cttgatatcattcagccacttcctgagtcctatgaagagatttcttctgatgctctaaca
gttagaggtttccaggaaaatgagtgcagagactatcgcctagagtattccgagggtgaa
tcgctcttttacatcaccagtccaagggacattgttatggctaaagagagggaccaagat
gaccacattgactggcttttggaaaagaagaagtatgaggaagctctgatggcagctgag
atcagccataagactataaaaaggcataaggttctggatataggcttatcatatatcaat
catctagtggagaaaggggactgtgaactggctgcacgaaaatgccagaagatacttggc
aaaaacatgaaactctgggaagatgaggtttacaggtttaaaaaaataggacagttgaag
gcaattagccaatatttgcctagaggggatctacgcctgagacctgcaatttatgaaatg
atccttgatgagtttttgaagagtgattatgagggcttttcaaccctgataagagagtgg
cctggagacttgtataacaacatgactattgttcaagcagtgctggatcatctgaagaaa
gatccacagaacaggacactgctcaaaactcttgctgaattgtatacatatgatcaacgc
tacgacagagctcttgaaatttatttaacattgaggcacaaagatgttttccagctgatc
cacaagcataatctgttcagttcaatcagggataaaattgtcctgctaatggaatttgat
gcagagaaagcagtggacatgctgttagacaatgaagataagatttcaactgaaaaagtt
gtagaagaattagaaaaccggcctgaattacagcatctgtatttgcacaaacttttcaaa
agggatcaccataaagggcagaaattccatgagaagcagattagtctgtatgctgaatat
gaccgtctaaaccttctaccatttctccgagacagcacccactgcccactggaaaaggct
cttgagatttgtcagcagcgaaactttgtagaagagactgtgtttctcttaagcagaatg
gggaacagccgcagagccctgcagatgataatggaggaactacacaatgtggataaagct
attgaatttgccaaggaacaggatgatgcagaactatgggaagacctaatcttgtattcc
attgacaaaccaccttttatcactggattactcaacaacattggaactcatgttgatccc
attcttctaattcatcgaattaaggaaggcatggaaatacctaacttaagggactctctg
gtaaaaattcttcaggattataatttgcagattttactacgtgaaggatgcaagaagatc
ctggtctcagactccctctctttgttgaagaaaatgcatagaactcaaatgaggggagtc
cttgtggatgaagagagcatttgtgaatcatgtctttctcctgtactgccttcagatgca
gctaagccttttaatgtaacagtattccactgcaggcatatgtttcacaaggaatgtcta
cccatacccagcatgatgtcaaccctgcagttctgcaacatctgcagcgctaagcaccgt
ggaccagggagcgcaatcttagaaatgaaaaagtag
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