Geotrypetes seraphini (Gaboon caecilian): 117356836
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Entry
117356836 CDS
T09159
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43 isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117356836 (NUP43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117356836 (NUP43)
03036 Chromosome and associated proteins [BR:
gsh03036
]
117356836 (NUP43)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117356836 (NUP43)
Chromosome and associated proteins [BR:
gsh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117356836 (NUP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
117356836
NCBI-ProteinID:
XP_033792481
UniProt:
A0A6P8R1E2
LinkDB
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Position
3:241528154..241606206
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AA seq
380 aa
AA seq
DB search
MEKFNAKFVSQKISKSRWRPLPPASLQLPDVFATGSWDNEENKVSIWSIGDFGSLNADGD
YEGDHQLLCDIKHNGDVLDMQFLDQERIVTASSSGSVTIFRHHQNNQTLSVNQRWERAHY
HSGPDIPSCGSAPCTGIVCNNPEIVSVGEDGRINLFKADSKKILRTIDNADSSTLHAVTF
LRTTEIMTVNSIGQLKMWDFRQQGNEPSQIFFLTGEKVPLYCVDRHPNQQHIVATGGQDG
MLSIWDVRQGSLPLSLLEAHDAEMWEVHFHPSNPDHLFTCSEDGSLWHWNASSDIAEKPS
FLQLAGRRNTTLSRSTLDHSNINQSLMSPWLSSDPAKGHMEITSLLPSQTLSVNSLDILG
QCLVCGTDAEAIHVTRQLFA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagaaattcaatgcgaagttcgtatctcagaagattagtaagagccgctggcgtccg
cttcctcctgcctccctgcagctgcctgacgtcttcgccactggctcttgggacaatgag
gaaaataaagtttcaatctggtctattggtgattttggaagcttgaatgcagatggtgat
tatgaaggtgatcatcagttactatgtgacatcaaacacaatggtgatgttctggacatg
cagtttttggaccaggaaaggattgtaactgcctcatcatcagggagtgtcaccatcttc
cgtcatcatcaaaataatcagactttatcggtcaaccagcgatgggagcgagcccactat
cattcaggtccagatatcccttcctgtggaagtgcaccatgtacaggcattgtctgcaac
aaccctgaaatagtctctgttggagaggatgggagaataaatctgttcaaagctgacagc
aagaagattttgcggaccatagataatgctgacagcagcactctccacgcagtgactttt
cttcgtaccactgagattatgactgtgaattccattggacagctgaaaatgtgggacttc
aggcagcaaggcaatgagccatcacaaatatttttcttgacaggtgagaaagttcccttg
tactgtgttgacagacatcctaaccagcaacacattgtagccacaggaggtcaggatgga
atgttgagcatctgggatgtcagacagggcagcttgcctctatccttgcttgaggctcat
gatgctgaaatgtgggaagttcattttcacccttcaaacccagatcatctgtttacatgt
tctgaggatggatctttatggcactggaatgcttccagtgatatagctgaaaaaccttct
tttcttcagctagcaggtagaaggaatactaccctgtcacgcagcactcttgaccactct
aacattaaccagtccctgatgagtccttggctaagcagcgatccagcaaaaggtcatatg
gaaatcaccagcctgcttccaagccagacattgtcagtgaacagcttggacattttagga
cagtgtctagtctgtggaactgatgcagaggctattcatgttaccaggcaactttttgcc
taa
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