KEGG   Geotrypetes seraphini (Gaboon caecilian): 117359337
Entry
117359337         CDS       T09159                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117359337 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsh03041]
    117359337 (SMNDC1)
Spliceosome [BR:gsh03041]
 Complex A
  U2 snRNP components
   U2 related factors
    117359337 (SMNDC1)
 Complex B
    117359337 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    117359337 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR GH43_C
Other DBs
NCBI-GeneID: 117359337
NCBI-ProteinID: XP_033797820
UniProt: A0A6P8QPM8
LinkDB
Position
4:complement(304626471..304689871)
AA seq 238 aa
MAEELAKQLAGYKAQLQQVEAALSTDEDNDDLLKLKKDLQEVIELTKDLLSSQPSEALSN
SDSSVAAQLSHSWKVGDKCMSVWSEDGQWYEAEIEEIDEENGTAAITFSGYGNAEVTPLF
NLKPVEEGRKAKENSGSKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNKAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atggccgaagaacttgcaaaacagctagcagggtacaaagctcagctccagcaagttgag
gcagctttgtctacagatgaagacaacgatgacttgttaaagctgaagaaggatttacag
gaagttatagaattaaccaaagacctcctctcctcacaaccttcagaagctttgtccaat
tcagacagctctgttgctgctcagctcagtcacagctggaaggttggggacaagtgtatg
tcagtctggagtgaagatggacagtggtatgaagcggagattgaggagatagacgaagag
aatggcactgctgctatcaccttcagtggctatgggaatgcagaggtcacgcccctattc
aacctcaagcctgtggaggagggaaggaaagcgaaagagaacagtggcagcaaacctatg
tccaaaaaagaaatgatagcccagcaacgagaatataaaaagaaaaaggctttgaaaaaa
gctcagagaataaaagaacttgaacaagaacgagaagaccagaaagtaaaatggcagcag
tttaataacaaagcttattctaagaacaaaaaaggccaggtaaagagaagcatctttgcc
tctcctgaaagtgtaacaggaaaggtcggcgtggggacatgtgggattgcagacaagcct
atgacacagtatcaagacacatcgaaatacaatgtcaggcatttgatgcctcagtaa

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