Geotrypetes seraphini (Gaboon caecilian): 117359343
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Entry
117359343 CDS
T09159
Symbol
WDR3
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117359343 (WDR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117359343 (WDR3)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117359343 (WDR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp12
NBCH_WD40
ANAPC4_WD40
WDR54
WD40_like
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
117359343
NCBI-ProteinID:
XP_033797838
UniProt:
A0A6P8QLQ9
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Position
4:101171796..101308946
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AA seq
936 aa
AA seq
DB search
MGLTKQYLRYVSSAVFGVIASQKANVVFLNLRGEKGRYVAVAACEHVFIWDVRKGEKVLI
LSGLKHEVTYLCPSPDGLYLAVGYEDGSIRIFSLLSGESNITFNGHKAAVTALNYDHLGG
RLVSGSKDTNVIVWDVINESGLYRLKGHKDAVTEAIFFREKNLLVTSAKDTLVKLWDLDT
QHCFKTMVGHRTEVWGMALLVKEKRILTGSGDSELRIWDIAYQGETNDPEEPKFKKYKGL
PSNEENTEESEESPEERILKCHKAGSIMREGRDRVVSLRVDHTGRILACHGTDAVLEVFC
IFSEDEINKKMEKKMKKAKKKAKKSNVEDNETEPDVEITLQDEIQRLIKIKASSKVKSFD
LVMCSKGELKIALLLQNNCLESYTLNTMAKVPDCNKTARITIGGHRSDVRTLSFSSDNIA
VLSASAETVKIWNRSTLQCIRTMSCEYALCSLFVPGDRQVIIGTKTGKLQLFDLASGSLL
ETIDAHDGALWSICLAPDQRGFVTGGADKCVKFWEFELVKDENNPQNSRRLSVKQTRVLQ
LDEDVLCVRYSPSQKLLTVSLLDCTVKIFYTDTLKFFLSLYGHKLPVLCMDISHDSTLIA
TGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVPKSHLFFTAGKDQKIKQWDADKFEH
VQTLEGHHQEVWCLAISPNGDYIVSSSHDKSLRLWERTREPLILEEEREMQREAKYEESM
AKGEEPVVAGEIPGESGLAGKKTIETIKAAERIMEAIELYREETKKREEHKAICKAAEKE
VPFLINPILQAYGNISPSAYVLEVFKKVKSSELEESLLVLPFSYVPDLLTLFNEYIQHGL
VVELICRCLFFILRIHFGQITSNQLLLSVIESLKNSTISRVTQVRDGLGFNMAGLQFLKR
EIEAKEEVTFFADAIAKFEEKKRKRKKREKIILAIV
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcactaaacagtacttgcgctatgttagcagtgcagtgtttggggtgattgca
agccagaaagctaatgttgtgtttttgaacctgcgaggtgagaagggacgttatgtagct
gtggctgcttgtgaacatgtctttatctgggatgttcggaaaggtgagaaggttcttatc
ctttcaggactcaaacatgaagtcacttatttgtgtccttctcctgatgggttgtactta
gcagtcgggtatgaagatggatccattcgaatttttagccttctcagtggagaaagtaat
ataactttcaatgggcacaaagctgctgtcacagctttaaactatgatcatctgggaggc
agactggtttcaggatctaaggacaccaacgtgatagtttgggatgtgattaatgaaagt
ggcttatatagattgaagggtcataaggatgcagtcactgaggccattttcttcagagag
aagaacttgcttgttacaagtgccaaagatacactggtgaaattgtgggacctggacact
cagcactgctttaaaactatggttggacaccgtacagaggtttggggaatggccttactt
gtgaaggagaaaagaattcttactggctcaggagacagtgaactaagaatctgggacatc
gcttatcaaggagagacaaacgacccagaagagccaaaatttaaaaaatacaaaggccta
cctagcaacgaggagaacactgaagagtcagaggagagtcctgaagagcgcatcttgaaa
tgtcacaaagctggttccattatgcgagagggaagggatagagttgtttccctgagagtg
gaccatacaggaaggattctggcttgccatggaacagatgctgttctggaagtattttgt
atcttcagtgaggatgaaataaacaagaaaatggaaaagaaaatgaagaaagcaaagaaa
aaggcaaagaaatctaatgtggaagacaatgaaacggagcctgatgtagaaataactctt
caagatgagatacagaggcttattaaaatcaaagcttcttccaaagtcaaatcatttgac
ctggtgatgtgttcaaagggggagctgaagattgcgttactgcttcagaataactgcctt
gagtcttacaccctgaacacgatggcaaaggttcctgactgcaacaagacggccagaatc
accattgggggccaccgcagtgatgtgaggacgctgtcatttagctcggacaatattgca
gttctgtctgcttctgctgaaacagtgaaaatatggaacagatcaactctacaatgtatt
cggacgatgtcttgtgagtatgctctgtgctctctcttcgtaccaggagacagacaagtt
atcatcggaacaaagacaggaaagctacagctgtttgatttggcatctgggagtttgctg
gagactatcgatgctcatgatggagccttatggtctatatgtcttgcacctgaccagcgg
ggttttgttacaggtggagctgataaatgtgtgaagttctgggagtttgagctggtgaaa
gatgagaacaacccccaaaacagtcggcgcctatcagtgaagcagacacgtgtcctccag
ctagatgaagatgtcctttgtgtgcgttacagtcccagtcagaagctcttgacagtttcc
ttactcgattgcactgtgaaaatcttctacacagacacacttaagtttttcctctccctt
tatggacacaagctgcctgtgctctgcatggatatatctcatgatagcacactgattgcc
acaggctcggcagacaggaatgtgaagatctggggcttggactttggagactgtcacaga
tctctctttgcccatgatgacagtgtgatgtatctacagtttgtaccaaagtcccatctc
tttttcacagctggaaaggatcagaaaattaagcagtgggatgcagataagtttgagcat
gttcaaaccttagagggccaccaccaggaagtgtggtgtttggcaatcagtcccaacggc
gattacattgtgtcttcatctcatgataaatccctgcgtctgtgggaaagaacaagagag
ccattgattcttgaagaagagagagagatgcaaagagaagcaaaatatgaggaaagtatg
gccaaaggggaggaacctgtggttgccggtgagatcccaggagagtctggattggcagga
aagaaaaccattgaaaccattaaagcagctgagcggatcatggaagccatcgaactctac
agggaagagactaaaaaacgagaggaacacaaagcaatttgcaaagcagctgagaaagag
gttccctttctgatcaaccccattctacaggcttatggtaatatttcaccatcagcttac
gtgttggaggttttcaagaaagttaaatccagtgagttggaagagtctcttctggtgcta
ccattctcttatgttccagatctgctcaccctctttaatgaatatattcagcatggtttg
gttgtggagcttatctgccgttgcctctttttcatactcaggattcactttggacagatc
actagcaatcagctcttgctgtcagttattgagagtctgaagaacagcactatttccaga
gtcactcaagttagggatggtctgggatttaacatggctggtcttcagtttcttaagaga
gaaatagaagccaaggaggaagtaactttttttgctgatgccatagccaagttcgaagag
aagaagaggaagagaaaaaagcgcgagaaaataatccttgcaattgtttag
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