Geotrypetes seraphini (Gaboon caecilian): 117361171
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Entry
117361171 CDS
T09159
Symbol
ABCA12
Name
(RefSeq) ATP-binding cassette sub-family A member 12 isoform X1
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117361171 (ABCA12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117361171 (ABCA12)
Transporters [BR:
gsh02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
117361171 (ABCA12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
AAA_30
AAA_22
Imm_superinfect
SRP54
DUF4162
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
117361171
NCBI-ProteinID:
XP_033802040
UniProt:
A0A6P8RHU6
LinkDB
All DBs
Position
5:163758236..164362809
Genome browser
AA seq
2624 aa
AA seq
DB search
MEKKTGVQKLVDSNSDRISCTTNKVLSFILILWPVSIFSILAITRTRFLPEPMHNCYLAP
RNLQSTGLFPFLQTFYCDDYARCKTKSYVKKASSRIYRKSSGNSMEESPHTDFSNATKTT
LTTLVEEHTLLYLEDSQNSSLNWTRAIPVHNRRISIEQMLNDNLTTGDIKSVVCNVVSKY
LKTNHETLNQYCLGNQLEFGLQEIGNIVLMILSEPENQILLLTDIVNTIIFIRQQWNDNT
ALLDFLVMLPNCFDDAISNCSTEKQMGNPTVTSNNSLFKNILKKIPCFLNCFQRVKQGDT
HTSDTSSWQSLKAWFEIVAANKFDYASEESHYWHKMKPYVGMAYWLITSLSRDKIATSNC
QFNISGPNVVCNSSINWIQFYQSAMVLMKDITHDPVAKERLLKLEEEFQKAFFNQSTDSP
YKSFRSCLRNLNESLWNQSREYLQEMGQLIQSAFAQKSAFSNSSLAAEFLYLKTLELRNL
TNHLCLGSSHQICQLTCQYLLLVLDVAEFTINTTKASNAAAGNVTVSHTGEASSRRTKPS
NDNLGDLATDGLNTNWFFQDIFPFESIQNVINYLSSLPTFQNISTLDYQARVGQLFGKSK
QVEMKLFNLGMSNTSIQAMMNMSIPNDKFQNILWFNELLECHNNHKKVPEEFQEFCNTTA
MQRYQMAVIFLQHIDLLKFIYQMFLPTKWQQTLDKIPVYFKLLDQEVNRRKSELLHDESI
VNLINMMNDIEHLDYSKTAVNSRLTNIEPTSLQSILKSSCTNNLLLPLISIVHLSNSSQD
SGHSNMTEEGMTNYGIPLNISSQCQKLIWSLVSTPSGAIAWNSLKPMLLGKILYTPHTPE
TEKIMNKSVSMLAEINKVNEDVKRKLNILQDNFLLFNKLVPILKDIQVILRDPLKQHIIM
LLKENNITELENDLDKFENLISQIESYENKSNGLIPLFSTLSKMLNCISYDRLLPFNSTK
KLQNNAMNLLRTNDLLASVIFQIPSTSRRRRRASSDKPILPSHVKYTIRMKNEFSEPSDR
LRDVYWVPGPHNSAIEYQSYGILFVFLQENIDRAIIEMQTQKNLQNIAVQFQPMPYPCYI
NDMFLYAVSLTFPMMLMIAWVLFIAVFVRKLVYEKDLKLHEYMKIMGVNSCSHFFAWFIE
SILFLLITIIILIITLKAGKVLPHSNGFILFLFLLDYSLSILAMSYLISSFFSNTNIAAL
SGSLIYIISFFPYIVLIANENHLSFAAKTLLGLFAPTSFSYASQYISRYESQDVGIQWHN
MYLSPVIQDETSFGWFCWLLVIDSFIYFIIGWYISMVFPGKYGIGVQWYFPVLPSFWAEY
CGCVTSSSQIESGPLFTFIRAGKEYASFHKKDSKDVHSSNLEPEPSALIAGVSLCQLTKK
FLSKAAVQNLNLNFYEGQITALLGHNGAGKTTTISLLTGLFSASSGTILVYGKDIRTHLN
QIRKSMGICMQYDVLFDYLTTKEHLLMYAFIKAPQWTKQELHDEVLRALKDIGLYRHRNK
PVGSLSGGMRRKLSICIALIGGSKVVILDEPTTGVDPCSRRSIWDIICKHKTGKTIILST
HHLDEAEVLSDRIAFLEHGGLKCCGSPLFLKETFGDGYHLTLTKKYPNLESTEHCDTEAV
TSLIQSHIPEARLKEDIGGELIYLLPPFSAEVSGSYLSLLRALDTSMNDIHIGCYGISDT
TIEEVFLKLTEGLDSEYGTKWPTTKTVIPVPNDTDSTVIDETSRSSYSFPDRDDLELTKL
KKVTGLTLTLKKIIAIFIKRFHNSRRNWKGLIGQILMPVLFVLASMGVGSISIGSTNYPA
LRLSPSIYGTSGQAVVFENESNSTNNLVSAMLSFPGIETMCMDNSLPRSCYKNLDKWKFD
GNQTANYDTCNCSTGFQICKEPNSVPSHTEIFSFQTLYDISGQNMENYFLATSREFVQQR
YGGWSFGLPLPSHLKLDIKPVPDNRTLNKVWYNPEGYHSLPAFLNSLNNFILRANLPQNK
SSQYGISTWSHPYPGSMKREQTMINVLVNLVVALSILVGYSIMTASFVIYVIKEHHTGAK
RLQHISGVSTTCYWITNFVYDMILYLIPVALSIGIIAIFRMPSFFDHQNLVAVFLLLVLF
GFSTFAWMYLLAGTFKNSGRAFIVYVSINLFIGIITIIPTVVLYILYRQRNSENLEILIR
IMKNVFRIFPQFCFGYGLIELSQQQGIGDLYTLYGIDYKIVTLNMDIVGWLLVAMAIQGT
VFFALRLLINETLFQVIRHFVKTKCQRQSHHVVKTVDEDEDVQAERIRVESGRAETDQLQ
LCGLSKIYHQVHKKIVAVNNMSLGVPAGECFGLLGVNGAGKTTTFKMLTGAIAPSSGSIR
IRDQTRNVLDVLDCDTDLSAFGYCPQEDALDKLLTGKEHLYYYARVHGIPEAQIKKVVTQ
LLHKLQLIPYKDILTSSYSCGTRRKLSTALALVGRPSILLLDEPSSGMDPKTKRHLWKVI
SEELRDQCAVVLTSHSMEECEALCTRLAIMVNGKFQCIGTLQHIKHRFGSGFTVTMHMKD
GEGHADTITQFMCMHFPNTYLKDQHFCMLEYHIPISAGGVANIFDLLETNKSDLNIRHFS
VSQTTLDEVFINFAQSQSGQEDFPSTDLGNATSRSPDTNEIVRT
NT seq
7875 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaaactggagttcagaagcttgtagattcaaacagcgaccgtatttcatgt
acaacaaataaggtattatcatttatcctgattctctggcctgtatctattttttcaata
ttggctattacaagaactagattcctcccagaacccatgcataattgttatcttgcacct
cgaaacctccagagtacaggtctatttccatttcttcaaactttttactgtgatgattat
gccaggtgtaagaccaaatcctatgtaaaaaaagctagttcaaggatttataggaaatca
tctggcaacagcatggaagaatctccacatacagatttcagcaatgcaacaaaaactaca
ttaacaactttggtggaagaacatactttattatacctagaagattctcagaactcttca
ttgaactggacccgtgcaatcccagtacacaatcgaagaattagcatcgaacagatgtta
aatgataacttgacaacaggagacatcaaaagtgttgtgtgcaacgtagtatctaaatat
ctgaagacaaaccatgaaactctcaaccaatattgtctcggcaatcagttagaatttggc
cttcaggaaattggtaacattgtattgatgatacttagtgaacctgaaaatcagattcta
cttctcacggatatagtgaataccataattttcatacgacaacagtggaatgataacaca
gccctactggattttcttgtaatgcttcccaactgctttgatgacgcaatcagtaattgc
tcaacagagaagcagatgggtaacccaacggtcacaagtaataatagcctcttcaagaat
attctaaaaaagattccatgcttcctaaactgttttcagcgggtaaaacaaggtgacaca
catactagtgatacttcatcctggcagtctttgaaagcctggtttgagattgtggccgca
aataaatttgattatgcatctgaagaaagtcactactggcataaaatgaagccatatgtt
ggaatggcttactggcttattacttctctgagccgcgataaaattgccacaagcaactgt
cagttcaacatttcaggtccaaatgtagtctgcaattcctccataaattggattcaattt
taccaaagtgcaatggtgttgatgaaggatattactcatgatcccgtggcaaaggagaga
cttttgaaactagaagaagaatttcaaaaagctttcttcaatcagtcaacagacagccct
tataaatcttttagaagttgcttaagaaatttaaatgaaagcctgtggaatcaatcacgt
gaatatttgcaggaaatgggacagctgattcagtctgcttttgcacaaaaaagtgcattc
agcaatagctctttggcggcagaattcctctatctgaagacattggaattacgaaaccta
acaaaccacttatgccttggatcatcccatcaaatctgccaactcacctgtcagtacctt
ctgttagtccttgatgtggctgaatttaccattaatacaaccaaagccagtaatgcagca
gcaggaaatgttacagttagtcacactggggaagcatcttctagacgcacaaaacccagt
aatgacaacttgggagacctagctacagatggcctaaatacaaactggttttttcaagac
atatttccatttgaatctattcagaatgtcattaattatctctcttccctgcctaccttc
caaaacatatcaactctggattatcaagctagagttggacagctttttggaaagtccaaa
caagttgaaatgaaactctttaacttaggaatgtctaatacaagtattcaggccatgatg
aatatgagcatcccaaatgataaattccagaatattttatggttcaatgaactacttgaa
tgtcataataatcataaaaaagttcctgaggaatttcaggaattctgtaatacaacagcc
atgcaacggtaccagatggctgtcatttttttacaacatatagatcttttgaagtttatt
tatcagatgtttttgcccacaaaatggcagcaaacacttgataagattcctgtctacttc
aagctattggatcaagaagtgaaccgaagaaaaagtgaactgcttcatgatgaatctata
gttaacttgattaatatgatgaatgatattgagcatttagattattcaaagacggcggtg
aattcgagattgactaatatagaaccaacatcactgcaaagcatactaaagtcttcatgc
acaaataatctactgcttccattgatcagcattgtccatctatctaattcttctcaagat
tcaggtcattccaatatgacagaagagggaatgactaattatggtattcccctaaatata
tcatctcagtgccaaaaacttatctggagtctggttagcacacccagtggagctattgca
tggaatagtttgaagccaatgctacttggaaagattctttatacaccacatactcccgag
actgaaaaaatcatgaacaagtctgtttcaatgttggccgagataaacaaagtgaatgaa
gatgtgaagagaaagctgaatatacttcaggataattttcttctgtttaacaaacttgtt
cccatcctgaaagatatacaggttattttaagggatcccttaaaacaacatattattatg
ctgcttaaggaaaataacattactgagttggaaaatgatttagataaatttgaaaattta
atttcacagatagagagctatgaaaacaaatccaatggactgatcccgttgttcagtaca
ttaagcaaaatgttaaactgcatttcatatgaccgacttttgccatttaacagcaccaaa
aaactgcaaaataatgctatgaacctactcaggactaatgatcttttagcaagtgtcatt
ttccaaattccctccactagcagaagacgcagaagagcaagttctgacaaacccatatta
ccttcgcatgtcaagtacaccatcaggatgaagaatgagttttctgagccatcagataga
ctccgtgatgtttactgggttccgggtcctcacaactcagctattgagtatcagagttat
ggcatattatttgtcttcttgcaagaaaatattgacagagcaatcattgaaatgcagacc
cagaagaatttacaaaatatagcagtccagtttcaacccatgccttatccctgctatatt
aatgatatgtttctgtatgctgtgagtctcaccttccccatgatgttgatgatcgcctgg
gtcctgtttatcgctgtgtttgtgagaaaacttgtgtatgaaaaagacttaaagctccat
gagtacatgaagattatgggtgtcaattcctgtagccatttcttcgcctggttcatagag
agcatcctctttctcttaattaccatcatcattcttattatcacactgaaagcagggaaa
gttcttccacatagcaatggcttcatcctattccttttcttactggattacagtctctct
attttagccatgagttacctcatcagctccttcttcagtaatacaaatattgcagctttg
agtggcagccttatatacatcatctccttttttccttacattgtgctgatcgccaatgag
aatcatttgagctttgctgcaaagacgttgctgggcttgtttgctcccacatcattcagt
tatgccagtcagtacatttctcgctatgaatcacaagatgttggaattcaatggcataat
atgtatctatcacctgttattcaagatgaaacctcatttgggtggttctgctggcttctt
gtgattgattcgttcatttatttcattattggctggtacatcagtatggtgtttccagga
aaatatggcataggtgtccagtggtacttcccagtccttccatccttctgggcagagtac
tgtggttgtgtaacttcaagttcacaaatagaaagtggtccattgttcacctttatcagg
gctggaaaggaatatgcatcctttcataaaaaggattctaaagatgtccactcttctaac
cttgaaccggaacccagtgcactcattgctggagtttctctgtgtcaactgaccaagaag
tttctatccaaagcagcagttcagaatctgaacctgaacttctatgaaggacagataaca
gcacttctggggcataatggtgctggaaaaacaactacaatatctttgctaactggactg
ttcagtgcctcttcaggcaccatcctcgtctatggaaaggacataaggacacatttgaac
caaatcagaaagagtatgggtatctgcatgcagtatgatgtgttgtttgactacctcacc
actaaagaacatctattgatgtatgcctttataaaggcaccacagtggaccaagcaggag
ttgcatgatgaagtactgagggctttgaaggacatcggactatacagacatcgtaataag
ccagtcggtagtttatcaggtggaatgagaaggaaactatcaatatgcattgctctcatt
ggtggatcaaaagtcgttatcttggatgaaccaactacaggagtggacccttgctctcga
cgaagtatatgggatatcatatgcaaacacaaaactggcaaaactattattctgtcaact
catcacctggatgaagcagaagttttgagtgatagaattgcgtttttggaacacggagga
ctcaagtgctgtggatcgcctctcttcctcaaagaaacatttggagatggataccacctc
actctcaccaaaaaatacccaaacctagagtcaactgaacactgtgacactgaagcagtg
acatctctgatccagtctcacattcctgaagctcgcctcaaggaggatattggaggagag
ctaatctatttgcttccccccttcagtgctgaagtgtctggatcctacctgtctctactc
agggcccttgacactagcatgaatgatatccatattgggtgctatggaatttcagatact
actatagaagaggtgtttcttaaactgactgaaggcttagatagtgaatatggtacaaaa
tggcccacaacaaagacagtgattcctgtacccaatgacactgactctacagtcatcgat
gagacttctaggagcagctacagctttcctgacagagatgatcttgaactcactaaacta
aaaaaagtgactggattgacattgacactgaagaaaatcatagctatatttattaagaga
tttcacaattctcgccggaactggaagggcttgattggtcagatccttatgccagtactc
tttgtactagcatctatgggagttgggtccattagtattgggtctacaaattatccagca
ctcagactttctccctctatttatggaacttcaggccaagcagttgtctttgagaacgaa
agtaatagcacaaacaatttagtctctgccatgctttcctttcctggaatagagaccatg
tgcatggacaacagtttacccagatcatgttataaaaatcttgacaaatggaaatttgat
ggaaaccagacagctaattatgatacctgcaactgttcaactggatttcagatatgtaaa
gagccgaattctgtaccgtcccatacagaaattttctccttccaaacactgtatgatatc
tctggtcaaaacatggagaactacttcctggcaaccagcagagaatttgtgcaacagaga
tatggaggatggagctttggattgcctttacctagccatctgaagttggatataaagcca
gtgcctgacaacagaacacttaataaggtgtggtataatcctgaaggatatcatagcctt
ccggcctttctcaacagtctgaacaacttcatcctgagagctaacctaccccaaaataaa
tcatctcaatatggcatatctacatggagtcatccttacccaggatcgatgaaaagggaa
caaaccatgatcaatgtcctggtgaatttggtagtggccttgtctatccttgttggctat
tccattatgactgccagttttgtaatttatgtgataaaggaacatcacaccggagcaaaa
cgactgcagcacatctcaggtgttagcacaacctgctactggataacaaacttcgtctac
gatatgatcttatacttgataccagtggcactttcaataggaataattgcaattttccgt
atgccttctttctttgatcatcagaacttagtagctgtatttcttctccttgtcttgttt
gggttttcaacctttgcatggatgtatttgctagcaggaacattcaagaactcaggaagg
gccttcatagtctatgtctccatcaacctgttcataggcattattactataattcccaca
gttgtgctttatatactttacaggcaaagaaacagtgagaacttggaaattctcatcaga
attatgaagaatgttttcaggattttcccccagttttgctttggatatggtttgatcgag
ctctcccagcaacaggggataggggatctctatacgttatatggaatagactacaaaatc
gtgactttaaacatggacatcgtgggttggctgcttgttgctatggctattcaaggaacc
gtcttttttgcactacgtttgcttatcaatgaaaccctatttcaagtcattaggcacttt
gtaaaaacaaaatgccaaagacagtctcaccatgtggtgaagacagttgatgaggatgag
gatgtccaagcagagaggatacgagttgagtctggtagggcagaaacggaccagctacag
ctttgtgggctctctaagatctaccatcaggttcacaaaaagattgtcgcagtcaacaat
atgagtctaggagtcccagctggtgagtgctttggtctgctgggtgtgaatggagctgga
aagacaaccacatttaagatgctcactggagccattgcaccttcaagtggaagcatacga
attagggaccaaactagaaatgtactagatgttcttgattgtgacacagatttgtcagcc
tttggctactgcccccaggaagatgctttggataaactgctgacagggaaagagcaccta
tattactatgctagggtgcatggcattccagaggcacagattaaaaaagtggtaacacaa
cttctccataaattgcaattgattccatacaaagacatattaacttccagctatagttgt
ggcacaaggaggaagttgtcaacagctcttgcacttgttgggagaccatccattctcctg
ctggatgagccaagctctggaatggaccctaaaaccaaacgacacctttggaaagttatc
tcggaagaactgcgagatcaatgtgcagtagtgctaacttctcacagcatggaagaatgt
gaagctctttgtaccaggctagctattatggtgaatggcaagttccagtgtatcggtaca
ctgcaacatataaaacacaggtttggaagtggatttactgtgacgatgcacatgaaagat
ggagaaggccacgctgatacaattactcagttcatgtgcatgcatttcccaaacacatat
ttaaaggaccaacatttctgcatgctggaatatcatataccgatctctgcaggtggagta
gcaaatatatttgatttgttagaaaccaacaaatcggatttgaatatcagacacttttca
gtgagtcaaaccactcttgatgaggttttcattaactttgcccagtcccaatcaggtcaa
gaagatttcccttcaaccgaccttggcaatgctacttccaggagcccagatactaatgaa
attgtccgtacctaa
DBGET
integrated database retrieval system
