Geotrypetes seraphini (Gaboon caecilian): 117363593
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Entry
117363593 CDS
T09159
Symbol
FANCM
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117363593 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117363593 (FANCM)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117363593 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
Helicase_C
DEAD
ResIII
ERCC4
HHH_2
Acetyltransf_14
HHH_5
Ribonuc_red_lgN
Motif
Other DBs
NCBI-GeneID:
117363593
NCBI-ProteinID:
XP_033807506
UniProt:
A0A6P8RRA0
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All DBs
Position
7:129229501..129366524
Genome browser
AA seq
2088 aa
AA seq
DB search
MNGKQKTLFQAWGSSVGTRVPPNRVAHQKARVGAPNLGVRRPAGSSLSVASGSGDGRGSG
ARDPEEDDDDEVLLVAVYEAEKRLNSSSAPEEPRSVAEPSSFPSLPGFDLAAGDLWIYPT
NYPVRDYQFRIAEMALLNNTLVCLPTGLGKTFIAAVLMYNFYRWYPSGKIVFMAPTKPLV
AQQIEACYKVMGIPQEHMAEMTGSTQALNRKEIWNNRRVFFLTPQVMVNDLSRGACPAAE
IKCLVIDEAHKALGNHAYCQVVRELSNYTSQFRILALSATPGSDTKAVQQVVSNLLIAWI
ELRSENSPDIQSFSHERLLKKFVVPLGDELVAFQNAYLKVLEAFAVHLIQHNVLSRRDIP
NLTKYQIILERDQFRKNPPIHIKGAQQGMVEGVFAVCISLYHGYELLMQMGTRSLFIYLR
AIMDGSKGMTRLKNELSRNAEFIDLYQQLESMFTNASAAVAGHEHAKPFIYSHPKLKKLE
EVVVEHFKSWERCEGKRISDENQVDTRVMIFSSFRDSVQEIAEMLNRNQPFVRVMTFVGQ
ATGKNMKGFTQKEQLEVIKRFRDGGYNTLVSTCVGEEGLDIGEVDLIICFDAQKSPIRLV
QRMGRTGRKRQGSIAVILTEGREERTYNQSQSNKKSIYKAILSNNKIRLHPHSPRMVPDG
LNPKVHKMYITQKIFEPKDNSRQNPKDRRLSTVCNKSSLFHNGPANSDLKEHWALTSEEF
EVWDRLYRIQDDDGIKNVKLPQVHFESIRDMEEIDESCSENIHELSLSEWKVWQNRPFPT
HMVDHSDRCNNFISIMEKIELMRHEEGTCRYDLELMSYLHKDDIIRTKVLHTKWISSMTE
NKPAQKLPLLSKVLTDNSKKPNLAISFFNPDKEFISLFKESSYKGTNRSSAFNMRAPNLM
EQYSSSQRNEGMCDVGTYPSMDCSAHSDTTNLPHEMVNTPLNEEVFTEQCYGESNVPCDI
SNKGDDIFREHCDTFTNHREALINKFRNQPFGRIDADSGYSSFTDETPSMSPSMFYPSET
EHNCCMFAAKFIHNNFSAKAVLTNVKRFLSQSPPPLDILCDLEKTQKEPKDKVLCCSPLD
RRSFLTRTKTQDTVLTGHTGSALFMAPEESVTLNAPNKLSLSTSSSSQINDILKDDVKVT
FDSIWDKMFDCDSEEDVGPEHEMSATVDHAQKRTISDKSWAEHENVDDGEDHTKYSMGYQ
NDSMDLFEDEIFFEANHGSSSCSNEHATLPSLHDSAPTIKPTDSSKIFDSCIYNECNSKG
NLDKLMHPENTTGHLPDFLEKSADNINYSQELFSVNFDLGFCIQDSDDDLVQEGAGINQN
NNKKASDMQNSLANGGSARDEEHVSGTNLSSPAVPCWRNGSLIVENRCSPVISPSENSRH
EIMSEKHISLFSPLQLPAKKVCDSPNGGVSTALISTPICKKDINGRFSNRTPPDVVYKLQ
QGMSLTPTSKRKVGSQAVKSILLNKAFANCIDFTNKTKPNKEENFQPQCNSPVKAESSNE
SEDELVFQRRKKKGNVLKSPEITESDCDFDSPIQAVKKRKHPLNTLAARQFLDEEAELSS
EGAEDVSSDESGDSSNEENASDLEFLDDNTQLSQDLNDSEMYGIYQKSVQHVTTGNQFKM
VHKENDMNIFSQIPEQDESYMEDSFCVQEEEEDNDYQRREESSEEEILVNFDLLNQDSFI
GGKKQYCTRRRLKQTKSTRYDDMPAKRKKGSRIIVLHDSSEEETDVIAKTEDAAMNSFQT
ISDRPCEKEAYFQNSLSIHSRAPIVNRKEPIHMVMKDRYQAQHNLKHSVSEMLDVKPENR
AKVVNANIKKYKKIQSTSKMEDCARNLSADSSACFSNLSEQTFVQTGSKVCLKEKQLPLC
ILVNTREVSSGPEVISLLKTKHAVKVEVCSLGDCDYIVSNRLAVERRSQLEFANSTNRNK
LTERIQHLQSMFERICVVVEKDKVKAGDTSRIFHRTKYYDSMLSSMISAGIRILFSSGQE
DTASLLKELALTEHRKNAGILVPTEVTGHKREVLQFYLSIPHVSYVTALTLCHHFDSIKQ
MTNSSVNEISTRAQVSHKKAEEIYSYVHYVLESQILAGSVNIKEKQDR
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaaacagaaaactctcttccaggcctggggttccagcgtcggtacccgagtc
ccgccgaacagagtggcccaccagaaagccagggtgggcgccccgaacttgggagtcaga
agaccagcggggtcctctttgagcgtggcgtcgggctctggtgacggacgcggctctggc
gcaagggacccggaggaggatgacgacgatgaggtgctcctggttgccgtgtacgaggct
gaaaagcgtttgaattcgagcagtgcccctgaggaaccgaggtctgttgccgagccaagt
agttttccatccctgcctggttttgaccttgcagcgggagatctctggatttatccgact
aattacccggttagggattaccaattcagaattgcagagatggctctcctaaataacacc
ttggtctgtctgcctaccggtctcggcaagaccttcatcgctgctgtgctgatgtacaac
ttctacagatggtatccgtctggcaaaatcgtgtttatggctcccacaaaacctctggtt
gcccagcagattgaagcctgctacaaagtgatgggtattccacaagagcatatggcggaa
atgacaggaagtacccaggctctgaatcggaaagaaatctggaacaatcgcagagtattt
tttctaacacctcaagtaatggtgaatgatctttctcgtggagcctgccctgctgctgaa
atcaagtgcttggtcattgatgaagcccataaagccttggggaaccatgcctattgtcag
gtggttcgggaattaagtaattatacaagccaatttcgaattttagctctgagtgctaca
ccaggaagcgatacaaaagctgttcagcaagttgtttcaaatctgttaattgcctggatt
gagctgagatcagaaaactccccagatattcagtccttctcacatgagcgactgctgaag
aaatttgttgtcccccttggtgatgaattggtagcatttcaaaatgcttaccttaaggta
ctagaagcatttgctgtccatttgattcagcataatgttttgtctcggagagatattccc
aatctgacaaaataccagataattctggaaagagatcagtttaggaaaaacccaccgata
catatcaagggagctcaacagggtatggttgaaggtgtctttgctgtctgtattagtttg
tatcatggttatgaactattaatgcaaatgggaacacgatctttatttatctatcttcgt
gcaattatggatggatcaaaaggaatgactcgtttgaaaaatgaacttagtcggaatgct
gagttcatagatctttatcagcagctagaaagcatgtttacaaatgccagtgccgctgtt
gcaggtcatgaacacgcaaagccttttatttatagtcatccaaaattaaagaaattagaa
gaggtagtggtagaacacttcaaatcttgggaacgatgtgaaggtaaaagaatatctgat
gagaatcaagttgacaccagagttatgattttctcctcattccgagacagtgtccaggaa
attgcagaaatgctcaatagaaatcagccatttgtgagggtaatgacctttgttggacag
gccaccggaaaaaacatgaaaggttttacacagaaggagcagttggaggttataaaacgc
ttccgcgatggtggctacaatacactggtctctacatgcgttggagaagaaggtttagat
attggagaagttgatcttattatatgttttgatgctcagaaaagtccaattcggttagta
caacgaatgggtcgaactggacggaagcggcaaggaagcattgcagttattcttacagag
ggacgagaagaacgaacttacaatcaaagtcaaagcaacaaaaaaagcatttacaaagca
attttaagcaataataaaatccgtcttcatcctcatagtccacgtatggtgcctgatggc
ttgaacccaaaagtgcacaaaatgtatatcacccaaaagatttttgagcccaaagacaat
tccaggcaaaatcctaaagacaggaggttgagcacagtgtgtaataaatcatctctgttt
cacaatggacctgcaaacagtgatttaaaggagcactgggccctgacatctgaagaattt
gaagtatgggacagattgtacagaatacaagacgatgatggcataaaaaatgtaaaactg
ccccaggttcactttgaaagtatcagggatatggaagaaattgatgaatcttgtagtgaa
aacattcatgaactctctctgagcgaatggaaagtttggcagaatcgtcctttccctact
catatggttgatcattcagatcggtgcaataattttattagcatcatggagaagatagaa
ttgatgagacatgaggagggtacctgcagatatgacttggagctgatgtcatatttacat
aaagatgatattattagaacgaaagttttacataccaaatggatttcttccatgactgaa
aacaaacctgctcaaaagttgcctttgttaagcaaagtcttaactgataactcaaaaaaa
ccaaacttggcaatctcattttttaatccagacaaagaatttatttccctgttcaaagaa
tccagttataagggaaccaataggtcatctgcctttaatatgagagcaccaaatctcatg
gaacaatattcgtcttcacaaagaaatgaaggcatgtgtgatgtcggtacatacccttca
atggactgttcagctcattctgatactactaatctgccccatgaaatggtgaatacacct
ctaaatgaagaagtgttcactgaacagtgctatggtgaatccaatgtgccatgtgatatt
tccaacaaaggagatgatatttttagagaacattgtgatacgttcacaaaccatagggaa
gcactgatcaataagttcagaaatcagccatttggtagaattgatgcagattctggttac
agtagtttcactgatgaaacaccatcaatgtctcctagtatgttttatccatctgagaca
gagcataactgctgtatgtttgcagctaaatttatacataacaatttcagtgcaaaagca
gtgttaacaaatgtgaaaaggtttttgtcacaatctcctcctcccctggatatactctgt
gatcttgaaaaaacacaaaaagaaccaaaagataaggttctgtgctgtagtccattagac
aggaggtcattccttacaagaacaaagacacaagatacagtattaactggtcatactggg
tctgctttattcatggctcctgaagaatcagtgactttaaatgcacccaataaattgagt
ctctctacaagtagttcctcacagattaatgacattttgaaggatgatgttaaagtaact
tttgattctatctgggacaagatgtttgattgtgatagtgaggaagatgtgggacctgag
catgaaatgtctgcaacagtggatcatgcacagaaaaggaccatttcagataaatcttgg
gctgaacatgagaatgtagatgatggtgaagatcacacaaaatattccatgggatatcaa
aatgacagcatggatttatttgaagatgaaatattttttgaggctaaccatggaagctct
tcttgttccaatgaacatgcaacattgcccagtttgcatgacagtgcaccaaccattaaa
ccaactgattcttcaaaaatctttgattcgtgtatttataatgagtgcaatagtaaagga
aatctcgacaaattaatgcatcctgaaaatacaactggtcatttacctgactttttggaa
aaatcagcagataatatcaactactcacaagaacttttttctgttaactttgatcttgga
ttttgtattcaggattctgatgatgacctggttcaagaaggggctggtataaatcagaat
aacaataagaaagcaagtgacatgcaaaatagccttgcaaacggtggatcagcaagagat
gaggaacatgtatctggaacaaatttgagttctccagctgtgccatgttggagaaatgga
agtctaattgtagaaaataggtgctcgccagtgatttcaccaagtgagaattcgagacat
gaaataatgtctgagaagcatatttcactattttctcctttgcagcttccagcaaagaaa
gtatgtgactctcctaatggtggtgtatccactgctttaatttccacaccaatttgtaaa
aaagatattaatggtagatttagcaacagaacaccacctgatgttgtttataaacttcaa
cagggcatgtctttgacaccaacatcaaagaggaaagttggctcccaggctgttaaaagt
attttgctaaataaggcctttgctaactgtatagacttcacaaataaaacaaaacctaac
aaagaggagaattttcagccccaatgtaattctccagttaaagcggaaagcagtaatgaa
agtgaagatgagttggttttccaaagaagaaagaaaaaaggaaatgttctgaaatctccg
gagattacagaaagtgattgtgattttgattcgccaattcaagctgttaaaaaacgcaag
catccacttaacacattagcagcaaggcagtttttggatgaagaagctgagctttcctca
gaaggagctgaagatgtgtcttctgatgaaagtggagattcatctaatgaagaaaatgct
tcagacttggagtttcttgatgataatacccagctttcacaggatttaaatgattcagag
atgtatggcatttatcagaaatctgtacaacatgtaaccactgggaaccagtttaaaatg
gtacataaggaaaatgacatgaacattttctcacagattcctgaacaggatgaaagctac
atggaagatagcttttgtgtacaggaagaagaggaagataatgactatcagagaagagaa
gagtctagtgaagaagaaattcttgtcaattttgacctccttaatcaggacagttttatt
ggtgggaaaaaacaatattgcactcgccgtcggctaaagcaaaccaagtcaactcgatat
gatgacatgccagcaaagagaaagaaaggatctagaatcattgttcttcatgattccagt
gaagaagaaactgatgtcatagctaaaacagaagatgcagccatgaatagttttcaaaca
atttctgacagaccatgtgaaaaagaggcttactttcagaattctctgtctatccatagt
agagctcctattgtgaatagaaaggagcctattcatatggtgatgaaggataggtaccag
gctcaacataatctgaaacattcagtctcagaaatgctagacgttaaaccagaaaataga
gcaaaagttgtcaatgctaatattaaaaagtataaaaagattcaatctacatcaaagatg
gaagattgtgcaaggaacctttctgcggactcttctgcatgcttttctaacttgagtgag
caaacctttgttcagacaggttcaaaggtttgtcttaaagagaaacaactcccactctgc
atcctagttaatacccgagaggtttcttctgggcctgaagtaatttccttgctgaagaca
aaacatgcagttaaggtggaggtctgttcgcttggagattgtgattatattgtgagcaat
cggctggcagtggaaagacgatcacagttggaatttgcaaatagcacaaacagaaataaa
cttactgagcggattcagcatttgcaaagcatgtttgaaaggatttgtgtggtagtggaa
aaggacaaagttaaagcaggagatacctcgaggatatttcatagaaccaagtattacgat
agcatgttgtcatccatgatcagtgctggaatccgaatactctttagctctggtcaagag
gatactgcaagtttgctgaaagaactagcgctcacagaacacaggaagaatgctggcatc
cttgtacctactgaggtgacaggacacaaaagagaagtcctgcagttttaccttagtatt
cctcatgtgagctatgtgacggcattaaccctgtgccaccactttgattctataaaacag
atgacaaacagttctgtgaatgagatatccactcgtgcgcaagtcagtcacaagaaagca
gaggaaatctacagctatgtgcattatgttcttgaatcacagatattagcaggaagtgtt
aacattaaagagaagcaagacaggtag
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integrated database retrieval system
