Geotrypetes seraphini (Gaboon caecilian): 117367514
Help
Entry
117367514 CDS
T09159
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117367514
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117367514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
PRY
zf-C3HC4_3
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-RING_6
Baculo_IE-1
Prok-RING_4
Sina_RING
zf-rbx1
DUF6788
U-box
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117367514
NCBI-ProteinID:
XP_033815994
UniProt:
A0A6P8SCJ2
LinkDB
All DBs
Position
10:30726987..30743977
Genome browser
AA seq
567 aa
AA seq
DB search
MVSLVLSKDRLLCSICLDVFQNPVSLSCGHNFCQTCINSHWFKVTWRYRCPLCRTEFATR
PYPEKNALLGDIAEEFLKAQERAVPPPLLLSDVPCDWCPATAQRKALKSCMRCLASFCQD
HLQPHLREEGAFADHPLEEPLIDLFARKCPAHGRLLELYCRRERCFLCAMCAFGDHAEHG
PVQLDEEARGRKVDLAVIQKEEKRRLKEADRNREEVRKYMEDVKHHALSRELHASTISRV
INELEELQKDDEEYFKEQEAVALEEITNRLKEMKVESMSIREKLFMLEDLQESCDHFRVV
QESESLKADTGPLLSPLLKVDSVSRMRCVDRMLSQLLNGIEKMLENSFARELLQNCAVLG
KVEPNILDADEDTASDSLLRLYNRAFKDVQKHLVSITLDSKTAHEYLQIADGNKIVSNIS
PACVSYHNLPERFEAKGQVMCTERFYKGQFYWEVKFSNPKVGIGLTYGSIIRKGVTRNCF
IGKNGSSWCLVVDGKTCRAWHNGVCVVAGIMKSSVLGVFLDYSAGLLDFYSIQKGSLTLV
HRFQASFEEPVHPAFWIGQRAALMLCH
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccctggtgctgtctaaggacaggctgctctgctctatctgcctcgacgtgttc
cagaatccggtgtccctgtcctgcggccacaacttctgccagacctgcatcaatagccac
tggttcaaggttacctggcgctaccggtgtcccctgtgcaggacagagttcgccaccagg
ccctacccggagaagaacgcgctcttgggggacatcgcggaggagttcctcaaggcgcag
gagagggccgtcccgccgccgctgctcctctcggacgtgccctgcgactggtgcccggcc
accgcccagcggaaagccctcaagtcctgcatgcggtgcctggcgtccttttgccaggat
cacctgcagccgcacctccgcgaggaaggcgccttcgccgatcacccgctcgaggagccg
ctgatcgacctgtttgcccgcaagtgccccgcgcacggccgcctgctggagctgtactgc
cggcgggagcggtgcttcctctgcgccatgtgcgccttcggggaccacgcggaacacggg
ccggtgcagctggacgaagaagcccgcgggaggaaggttgatcttgctgttatacagaag
gaagagaagagacggttaaaggaggcagatcggaacagggaagaagtaaggaagtacatg
gaggatgtgaagcaccatgccctctccagagagctccatgctagcacaatctccagagtg
atcaatgaacttgaagaactccagaaagatgatgaagaatatttcaaagaacaggaggcc
gtggccttggaggagatcacaaaccgcctgaaagagatgaaggtagagagcatgtcgata
agagagaaactcttcatgcttgaggatttgcaggaaagctgtgaccacttcagagtggtg
caggaatctgagagcctgaaggctgacactggccctctcttgtcgcctttactgaaggta
gactcggtgagcagaatgcgttgtgtggacaggatgctgtcgcagctcttgaatggcatt
gagaaaatgctggagaattcttttgctagagaattattgcagaattgtgctgttttagga
aaggtggagcctaatattttggacgctgacgaagatactgcctcagactctctcttacgc
ctttacaacagagcattcaaagatgttcagaaacatcttgtgagtatcacactggactcc
aagacagcacatgaatatcttcaaattgctgatggcaacaagattgtcagtaatatctct
ccagcttgtgtgtcctaccataacctacctgagaggttcgaggctaaggggcaggtgatg
tgcacagaaaggttctacaaagggcagttctactgggaggtaaagttcagcaatcccaaa
gtgggcattggcttgacttatggaagcatcataaggaaaggggttacaaggaactgcttc
attgggaagaacggctcttcctggtgcttggtggttgatggcaagacctgcagagcttgg
cacaatggggtgtgtgttgttgcggggattatgaagagttcagttctaggggtattccta
gattattctgctggtttactggatttctacagcatccagaagggcagcttgacccttgtg
cacagatttcaggcatcctttgaggagcctgtgcatcctgcattctggattggacaacgt
gctgctttgatgctttgtcattag
DBGET
integrated database retrieval system
