Geotrypetes seraphini (Gaboon caecilian): 117367748
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Entry
117367748 CDS
T09159
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117367748 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117367748 (DDX31)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117367748 (DDX31)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117367748 (DDX31)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
Helicases
117367748 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
iPGM_N
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
117367748
NCBI-ProteinID:
XP_033816524
UniProt:
A0A6P8SE72
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All DBs
Position
10:complement(55574244..55696444)
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AA seq
730 aa
AA seq
DB search
MDDEGLILNITENSRSLVILSRQKRSQTQMYRPQTKWLKQGPKTVKRKPQEAAEGPSPKR
KAEALFSPVKAVTKDDHQRFLKRKPAKESSPREHQNKKREENQEERPFIKTSSLFKNNPE
IPEINRPAVKQTQEKVFTSDLFSELDLHPHLVSTITRVLKMTKMTSVQKLTIPAFLAGRD
IMVRSQTGSGKTLAYSIPLVQILQGIKPKIQRSNGPYALILVPTRELALQSFGIFQKLLK
PFTWIVPGVLMGGEKKKSEKARLRKGINILISTPGRLVDHIRSTRTICFNRVQWLLVDEA
DRMLDLGFEKDVTVILNTLNKEHERRQNIFLSATLTEGVTRLADISLQDPMNITVTEEAG
GETPEDKRPGVVCGCPSTLQASVDKEHFAVPETLTQHIVVVPSKLRLVTLAAFILGKFQS
EKSPKLIVFFSTCELVEFHHTLFTNVLTASQQRAGSQPLIATRLEFLRLHGNMEQEERTE
VFLKFSQSSSSVLLCTDVAARGLDIPQVTWIVQYNAPCFPTEYIHRIGRTARIGSQGNSL
LVLAPSEVEYINSLAAYNISVSEVKMEDILSSLLMNEHFKARRQSKKKSSGAGPQEVRER
ATVLQTAFEDYVHAAEENVIKAKKALQSFIRSYATYPQSLKHIFHVKSLHLGHIAKSFGL
RDAPQNLNFADPTSPKRSKKPKPKRSTLYKKNSGKQCLRDMLCSEYASGLRTKGLKARKA
NKTETQEQQT
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagggcctgatcctgaacattaccgagaattctcggtcactggtcattctg
tcacgacaaaagagatctcagactcagatgtacagaccgcaaaccaaatggttaaaacaa
ggtcctaaaactgtgaaaagaaaacctcaggaggctgctgagggaccttcaccaaaacga
aaagctgaagcacttttttctccagtcaaagcagtcactaaagatgaccatcagagattt
ctgaaaagaaaaccagctaaggaatcctctccaagagaacaccagaataaaaagagagaa
gaaaatcaagaagaaagaccgttcattaaaacttcttccttgtttaaaaataacccagag
attccagaaattaacagacctgcagtgaaacagacacaggaaaaagtttttacttcagat
ttgttcagtgagctggatctccatccacatttggtgtctacaatcactcgtgtcctgaaa
atgacaaagatgaccagtgttcagaagctaaccatccctgcattcctagcaggtagagac
atcatggtgagatcccagacaggctcgggtaaaacactggcctatagcattcctttggta
cagatccttcagggaataaaaccaaagatccagcgcagcaatggcccttatgcccttatt
ttggtccccacaagagagcttgctctgcagagttttggtatatttcaaaaactgctgaag
ccgtttacatggattgtgcctggagtgttaatgggtggagagaagaagaaatctgaaaag
gcgcgattacggaaagggatcaatatccttatttccacccctgggcgtctggttgatcac
atcagatccacaaggactatttgctttaaccgtgtgcagtggctgttagtggatgaggca
gacaggatgctggacctgggctttgagaaggacgtaacggtgatcctgaatacactgaat
aaggagcatgagagacggcagaacatttttctctctgctacgctcacagagggtgtgaca
aggttagctgatatcagcttgcaagatcccatgaacattactgtgacagaagaagctggt
ggtgagacacctgaggataaaaggccaggagtggtctgtgggtgtccttcaaccttgcaa
gcaagtgtagataaggaacattttgcagtcccagagactctaacacagcacattgtggtg
gttcccagcaagcttaggcttgtcacattggcagcctttattctcggaaagttccagtct
gagaaatcccccaagctgattgtatttttctccacctgtgaactggtagagtttcaccat
accctctttaccaatgtgctaacggcaagtcagcagagagccggatcgcagccactcatt
gccacacggctagagttccttagactacatgggaacatggagcaagaggagagaacagaa
gttttcctgaaattttcacagtcatcatctagtgtcctgctgtgcaccgatgtggctgca
cgagggctggatataccgcaagtgacatggattgtccagtataatgctccctgctttcct
acagagtacattcacaggattggaaggacagctcggattggttctcaaggaaacagcctg
ttggttcttgctccttctgaggtggagtatatcaactcattggctgcttacaacataagt
gtctcagaagtaaaaatggaagacattctctccagtttgttgatgaatgagcattttaaa
gctagaagacaaagcaaaaagaaatcatctggtgcaggcccacaggaagtgagggaacga
gcaactgtcttgcagaccgcatttgaggactatgttcatgccgctgaggagaatgtcata
aaggcgaaaaaagccctgcagtccttcattcgatcctatgccacatatccccaaagcctg
aagcacatctttcacgttaagtctctgcatctgggccacattgcaaaaagctttggactg
agagatgctcctcagaatcttaatttcgctgaccctacaagtcccaagaggagcaagaaa
cccaaaccaaaaaggtcaactctttacaagaagaattctggtaaacaatgcctccgtgat
atgttatgttctgaatatgccagtgggctaagaactaaggggctcaaggccaggaaagca
aacaaaacagagacccaggaacaacagacatga
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