Geotrypetes seraphini (Gaboon caecilian): 117369084
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Entry
117369084 CDS
T09159
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117369084 (YTHDC1)
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117369084 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
117369084
NCBI-ProteinID:
XP_033818946
UniProt:
A0A6P8SXD4
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All DBs
Position
1:345858990..346256397
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AA seq
745 aa
AA seq
DB search
MAADGRDEQGGEVNVLEDILTEAPDHDDELYNLESEQDVNEKKALQRIYLSARMHSATFK
PGSKRKSDRMDTAESKRQKPSHSRQLAQRLLSSSIGNKRIINTKGKHMSEYKTEEFHKPE
RNRRPDVDRKSRIPSSSRDSYRAQPEKTLVRRRRAKSFTPEASVEKIRHIIDRRTSRSSH
SSKEDVNSDEYGSDQESGSSVSSDDQGNSEAEEEGMEEEEEDDEEEGEEDEEYDQEERDQ
REGNDYDTRSEATDSDSDSGSFTDGDSIRSGSISDISDQKKKERKRARGISPIVFDRSGS
SASESYAGSEKKHEKLSSSVRAVQKDQTSKLKYVIQEARFFLIKSNNHENVSLAKAKGVW
STLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMNAK
MLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIEGECGTQLCLLFPPDEK
IDLYQIIHKIRHKRRLHSQPRSRGRPSRREPVREVGRRRPEEYDIHNRKKPRIDYPPEFH
QRPGYIKDPRFQEVDRRFTGVRRDVFLNGSYNDYVREFHNMGPPPPWQGMPPYPGMEQPP
HHPYYQHHPPPPQAHPQYSGHHPVPHDARYRDKRVHDYDMRVDDFLRRTQAVVSGRRSRP
RERDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRDRPRDTRRDRERD
RGRERERERVRDRERDRGERGRYRR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacggcagggacgagcaagggggtgaagtcaatgttctggaagacatactt
actgaagcaccagatcatgatgatgagctgtataaccttgaaagtgagcaagatgtgaat
gagaagaaagctctacagcgcatctacctgagtgcacgtatgcacagtgccactttcaaa
ccaggatccaaaagaaagagtgatagaatggatacagctgagagtaaaagacaaaagcct
tcacattcaagacagctggcccagagactacttagttcgtctattggcaacaaaagaata
ataaataccaaaggaaagcatatgtcagaatataaaactgaggaatttcataaaccagaa
agaaacaggcgtccagatgtggataggaagtcccgcatcccaagtagttccagggattcc
tacagagcgcagccagaaaagaccttggttagaaggaggagagcaaagtccttcacacca
gaagcatctgttgagaaaattaggcatattatagatagaagaacaagcagatccagccat
tcttccaaagaagatgtgaattcagatgagtatggttcagaccaggaaagtggcagcagc
gtgtcttctgatgaccaaggcaacagtgaagctgaggaggagggcatggaggaagaagag
gaagatgatgaagaggaaggtgaagaagatgaggaatatgatcaagaagagagagatcag
agggagggaaatgactatgatactcgaagtgaggctactgattctgactctgattcaggg
tccttcacagatggagattcaatcagatcaggttccatctctgacatatcagatcagaaa
aagaaggaaaggaaaagggctagaggtatatctccaattgtgtttgatagaagtggaagt
tctgcatcagaatcatatgcaggttcagaaaagaagcatgaaaaattatcatcttctgtt
cgtgctgttcaaaaagatcaaaccagtaagcttaaatatgttattcaggaggcaagattt
ttccttatcaagagcaacaaccatgaaaatgtctctcttgccaaagccaagggtgtctgg
tctaccttgcctgtaaatgagaagaaacttaatgcagccttcagatctgcaaggagtgtt
atcttgatattttctgtgagagagagtgggaaatttcaggggtttgcaaggctttcgtct
gaatcacatcatggaggatcccctatacactgggtgctgcctgcaggaatgaatgcaaaa
atgctaggtggtgtgtttaaaattgactggatttgcaggcgtgaattgccgttcacaaaa
tccgctcaccttaccaatccttggaatgagcacaaaccagtgaagattggacgcgatgga
caggaaattgagggtgaatgtgggactcagctttgtcttctgttccctccggatgaaaaa
attgacttgtatcagatcattcacaaaatacgtcacaagagaagattgcactctcagccc
cgatcaagaggacgtccgtcacgccgagagccagtgcgggaagtgggaaggcgtcgacct
gaagagtatgatattcataacagaaagaaaccaagaattgactatccccctgaatttcac
caaagaccaggatatatcaaggatccccgtttccaagaagttgacagacggtttacagga
gttcgtcgtgatgtctttttgaatgggtcttacaatgactacgtaagggaatttcacaac
atggggcctccaccaccttggcaaggaatgcccccctatccaggtatggaacagccacct
catcacccatattaccagcatcacccgccaccacctcaggctcatccccagtactcagga
catcatccagtgccacatgatgcaagatacagagataaacgagtacatgactatgacatg
agagtggatgacttcctgaggcgcacacaggctgtcgtcagtggtcgtagaagcagacct
cgagagagagaccgagacagagaccgagacagagaccgagaccgagaccgtgatcgtgat
cgtgatagagatcgagatcgtgacagagaccgtgatcgagaccgtgaccgtgacagagac
cgagatcgagatcgtgaccgagaccgtcccagagataccagaagagaccgagaacgtgac
cggggaagagaaagagaaagagagagggttcgagacagagagagagatcggggcgaaaga
ggaagatacagaagataa
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