Glycine soja (wild soybean): 114382303
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Entry
114382303 CDS
T06057
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114382303
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsj01002
]
114382303
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsj04121
]
114382303
Enzymes [BR:
gsj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114382303
Peptidases and inhibitors [BR:
gsj01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114382303
Ubiquitin system [BR:
gsj04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114382303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
114382303
NCBI-ProteinID:
XP_028197421
LinkDB
All DBs
Position
13:6058462..6137480
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AA seq
1118 aa
AA seq
DB search
MTVMMPAPIDQQEDEDVLVPDADLPENNHQPMEVVAQPENANTVESQPVEDPPSSRFTWR
IDNFSRLNTKKLYSEIFVVGGYKWRVLIFPKGNNVDYLSMYLDVADSASLPYGWSRYAQF
SLAVVNQMHNKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLVHDTLIVEAEVL
VRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTG
SIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVESLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKED
NKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAA
HLRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDEELKEQIGKDIYFDLVDHDKVRSFRV
QKQTSFNLFKEEVAKEYGIPVQFQRYWLWAKRQNHTYRPNRPLSHIEEAQSVGQLREVSN
KVHNAELKLFLEVEPGMDSCPIAPPDKTKDDILLFFKLYDPEKEELRYVGRLFVKCTGKP
LEILARLNEMAGYDPEEDIALYEEIKFEPNVMCEPIDKKVTFRTSQLEDGDIICFQKASS
MDIEENVRYPDVPSYLEYVHNRQVVHFRSLERPKEDDFFLEMSRLFTYDDVVERVAQQLG
LDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQG
LKTLKVAFHHATKDEVVIHTIRLPKQSIVGDVLDDLKTKVELSDPEAELRLLEVFYHKIY
KVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFNKDAAQNQMQIQNFGEP
FFLVIHEGETLDEIKVRIQKKLQVPDDEFCKWKFAFLSLGRPEYLQDSDVVSSRFQRRDV
YGAWEQYLGLEHTDNAPKRSYAVNQNRHTFEKPVKIYN
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatgatgcccgctcccattgatcagcaagaggacgaggacgtgctcgtgccg
gacgcggatttgcctgagaacaatcaccaacccatggaagttgtagctcaacctgaaaat
gccaatactgtggagagtcagcccgttgaagatcctccgtcatctagatttacatggaga
attgataacttttcaaggctgaatacaaagaagctctattcggaaatatttgttgttggt
ggctataaatggcgtgtgcttattttcccaaaaggaaacaatgtggactatttgtccatg
tatttggatgttgctgattcagccagtttgccctatggttggagtagatatgcacagttt
agcttggcagttgttaatcaaatgcataataagtattctgtgagaaaagacacacagcac
cagtttaatgcacgcgaaagtgattggggtttcacatccttcatgcctcttggtgaattg
tatgatcctagtagagggtatcttgtgcatgatactcttatagtcgaagctgaggttctt
gttcgtaggattgttgattactggacttatgattcaaagaaggagactggctatgttggg
cttaagaaccaaggagctacgtgttatatgaattctctactccaaaccttgtatcatatt
ccttattttagaaaggctgtgtaccatatgccaacaactgagaatgatatgcccactggt
agcatccctttggccttgcaaagtttattctacaagcttcaatacagtgacaccagtgtt
gcaacaaaggagctgacaaagtcttttggatgggatacatatgattctttcatgcagcat
gatgttcaagaactaaatcgggttctttgtgaaaaacttgaagacaaaatgaagggaact
gttgttgagggaaccatacaaaaattatttgaagggcaccatatgaattacatagaatgc
atcaatgtagactacaaatcaactagaaaggagtcattttatgaccttcagcttgatgtt
aaaggttgtcgtgatgtttatgcttcctttgataagtatgtcgaagttgaaagtcttgag
ggggataacaaatatcatgctgaacagtatggtttgcaggatgctaagaaaggtgtccta
tttattgattttcctcctgtccttcaactccagctaaaaagatttgaatatgattttatg
cgggatactatggttaagattaatgaccgttatgagtttcccttacaacttgatcttgat
cgtgaggatgggaaatatctatcacctgatgctgataggagtgtccgcaatctttacaca
cttcacagtgttttggttcacagtggaggtgtgcatggtggacattattatgcttttatc
aggccaaccctctctgaacagtggtacaaatttgatgatgagagggtgacaaaagaagat
aataaaagagcattagaggagcagtatggtggtgaggaagagttaccacagacaaatccc
ggattcaataacaccccatttaagttcaccaaatactcaaatgcttatatgctggtgtat
atacgtgaaagtgacaaggacaaaatcatatgcaatgtggatgagaaagacattgcagca
catttaagggagaggttgaagaaagaacaagaagagaaagagcacaaaaagaaagaaaag
gcagaagctcacctttatactattataaaggtggcacgagatgaagaacttaaagagcag
attggaaaggatatatactttgatcttgtagaccatgacaaagtgaggagtttcagagtc
caaaagcagacatcttttaaccttttcaaggaagaggttgcaaaagagtatggtatacca
gttcaatttcagcgttattggctatgggcaaagcggcaaaaccatacttatcgtcctaat
agaccattgagtcacattgaggaagcacaatctgttggacaattgagagaagtgtccaac
aaggttcacaatgcagaactgaaattgtttttggaagtggaaccggggatggattcatgt
cccatcgcaccacctgacaagaccaaggatgatatattacttttcttcaagctatatgat
cctgaaaaagaggagctgcgttatgttggaaggctctttgtgaagtgtactggtaagcca
ttggaaatcttagcgaggttaaatgaaatggctggttatgaccctgaagaagatattgca
ctatatgaggaaattaagtttgaaccaaatgtcatgtgtgaacctattgacaagaaagta
acatttcgaacaagccagctggaagatggagatatcatttgctttcagaaggcttcctct
atggatattgaggaaaatgtccggtatccagacgtgccctcatatttagaatatgtgcac
aatcgccaggtggttcactttcgatctctggagagaccgaaggaagatgactttttcttg
gagatgtcaaggctttttacatatgatgatgtggtggagagagtagcccaacaacttggt
ttggatgatccgtccaaaatacggcttacaccacacaactgctactctcaacaaccaaaa
ccccagcctatcaaataccgaggggtagaacatttgtctgatatgttagttcattacaat
cagacatcggatatactatactatgaagtacttgacatccctctaccagaattacaaggg
ttgaaaactctgaaagtcgcatttcatcatgccactaaggatgaagtggttattcatact
attcgactcccaaagcagagcattgttggggatgtccttgatgatcttaaaacaaaggta
gagttatctgatcctgaagctgaacttcggttgcttgaagtcttctatcacaaaatatac
aaggtcttccctcccaatgaaaagattgaaaacattaatgatcaatactggacattacga
gcagaggagattccagaagaagagaaaaatcttggtcctcatgatcgtctaattcatgtg
taccatttcaataaagacgcggctcaaaaccaaatgcaaattcaaaactttggggaacct
ttttttcttgttatacatgaaggtgaaactctagacgaaattaaagtgcgaatacaaaag
aaacttcaagttcctgatgatgaattttgcaagtggaaatttgcatttctatcactgggc
cgtcctgagtaccttcaagattctgacgttgtatccagtcgttttcagagaagagatgtt
tatggtgcttgggagcaatatcttggcttggagcatactgacaatgctcctaaaagatca
tatgctgtcaaccagaatcgccacacatttgagaagccagtaaagatttataattag
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