Glycine soja (wild soybean): 114384963
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Entry
114384963 CDS
T06057
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
gsj
Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsj03016
]
114384963
Enzymes [BR:
gsj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
114384963
Transfer RNA biogenesis [BR:
gsj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
114384963
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GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
114384963
NCBI-ProteinID:
XP_028200622
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Position
14:6258323..6264522
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AA seq
642 aa
AA seq
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MSISISLSSVPARLTLLAVFSATTFYCLYKYHRLRHLKLFLNPNPNPNPKIIFVSETGTS
KTLARRLHGLLASNDVAFDLVDAQHYEPEDLPKETLIILVASTWLDGAPSAASRFFATWL
ADAAADFRAGSLLLSRCRFAVFGVGSRAYGDSFNAVARGLAKHLRALGAAEVVPLFEGDV
DGGDVDAVFDRWCEKVVAVLKSGSVVESCDNDGAEESGVVSSSEDESDVDSSEIVDLEDI
AGKAPSWRKAVANGEESNEKLNGRREMVTPVIRANLEKQGYKIIGSHSGVKLCRWTKAQL
RGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWQMDDPIEIVNS
AIDLHTNMIKQMKGVPGVTLERLSEGLSPRHCALSLVGEPIMYPGINALVDELHKRRIST
FLVTNAQFPEKIKSLKPVTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQ
RTVYRLTLVKGWNTADIDAYSKLFSLGEPDFVEIKGVTYCGSSTTSKLTMDNVPWHADVK
AFSEALALKSQGEYEVACEHAHSCCVLLAKTNKFKIDGQWYTWIDYEKFHDLVASGRSFD
SRDYMAATPSWSVYGSEEGGFDPGQLRYRKERHHKSTRNQAG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatatcaatatcgttatcctcagtccccgcgcgtctcacactcctcgctgtcttc
tccgccaccaccttctactgcctctacaaatatcaccgcctaagacaccttaaactcttt
ctaaaccctaaccctaaccctaaccctaagattatcttcgtctccgaaaccggaacctcc
aaaaccctcgcgcgtcgccttcacggcctcctcgcctccaatgacgtcgcattcgacctc
gtcgatgcgcagcactacgagcccgaggacctccccaaggagacgctcatcatcctcgtc
gcatccacgtggctggatggcgctccctccgccgcctcccgcttcttcgccacctggctc
gccgacgcggccgccgacttccgcgccggctccctcctcctctcccgctgccgcttcgcc
gtctttggcgtcgggagccgggcctacggcgactccttcaacgccgtcgcgaggggcctc
gcgaagcacctgagggcgctcggcgcggcggaagtcgttcccctgttcgaaggggacgtc
gacggcggtgacgtggatgcggttttcgatcggtggtgtgagaaggttgtggcggttttg
aaaagtggtagtgttgtggaaagctgtgataatgatggtgctgaggaatctggcgtcgtt
tcgagttctgaagatgagtctgatgtggatagtagtgagattgttgatcttgaggacatt
gctggtaaagctccgtcgtggaggaaggcggtggctaatggggaagagagcaatgagaaa
ttgaatggcagaagagaaatggttactccggtgattcgagcaaatttagagaagcagggg
tataaaattattgggtcgcatagtggtgtcaagctttgtagatggaccaaggcacagctt
agaggtcgaggtggttgctataagcactcgttttatggaattgagagtcacagatgcatg
gaggcaacccctagcttggcatgtgctaataaatgtgttttctgctggaggcatcacaca
aatccagtagggaaaagttggcagtggcagatggatgatccaatagagattgtaaattct
gcaatagacctgcatacaaatatgattaaacaaatgaaaggagttcctggagtcaccttg
gagcgattatctgaaggcctctcaccacgtcattgtgcattatctcttgttggtgaacct
attatgtatccagggataaatgcacttgtggatgagctgcacaaaaggaggatttccact
tttctagttacaaatgcacaatttccagagaaaattaagtcactgaaacctgtcacccag
ttatatgtaagtgtagatgctgcaacaaaggactctttgaaggcaattgatagaccactc
ttcggagatttctgggagcgattcattgattccttgactgctctaaaggaaaaacatcag
cgaactgtataccgtctgaccctggtgaaaggctggaataccgcagacattgatgcttat
tctaagctctttagtttaggagaacctgactttgttgaaatcaagggagttacatattgt
ggctcgtccactacatcaaaattgacaatggataatgtcccttggcatgctgatgtgaaa
gctttttctgaggccctagctttgaaaagccaaggagagtatgaagtcgcgtgtgagcat
gctcactcatgctgtgtcctcttagcaaaaactaataagttcaaaattgatggtcagtgg
tatacatggatagactatgaaaaatttcatgatctggtggcatctggaagatcttttgac
agcagagattacatggctgccacaccatcgtggtctgtttatggatcagaggaaggtgga
tttgatccaggacaattgagatataggaaagagagacatcacaagtcaacccgcaatcaa
gcaggttag
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