Glycine soja (wild soybean): 114399899
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Entry
114399899 CDS
T06057
Name
(RefSeq) uncharacterized protein LOC114399899 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114399899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114399899
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114399899
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114399899
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
114399899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
Motif
Other DBs
NCBI-GeneID:
114399899
NCBI-ProteinID:
XP_028217920
LinkDB
All DBs
Position
19:44801383..44808480
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AA seq
1002 aa
AA seq
DB search
MNMERSLDRSREPGPKKPRLIEELSARQLPLRPAAVTTLPSTRFRAYDRDSGGGGGYQPQ
PPPHQELVIQYKTALAELTFNSKPIITNLTIIAGENLSAAKAIAATVCANIIEVPSDQKL
PSLYLLDSIVKNIGRDYIKYFASRLPEVFCKAYRQVDPCVHSSMKHLFGTWKGVFPPQSL
QMIEKELGFAPAVNSSASVSATVRSDLQSQRPPHSIHVNPKYLERQRLQQSSRSKGVVND
MTEAVLNSNEDLERPDRALSAARPWLDPRINMLCCILQNNQHTHRDAFNDSVPEKSMDGS
SYGGSEYSSVISSNLGSGAGRTGSKLIDLGHDRTWFKTDGGDADTTSGQRNGFNLKHSFS
NHEAPKSMNLDAHCQPRQSITNKQNDVMSCNWKTSEEEEFMWDEIDNGLIDHGPNVSKTL
STDTWMADVENLEGEDHLQITRPFGAKVNREISTVKNQLPGLGGHPPSSWQLQNLKPGYS
EGFVSSHSALPANASSLTVKKGNQSFMSNSVVGRVKFVGQQFDSGETESPSWQSPLRQQS
PSLPGTVHHPHSMQNFADQELPQNLKTSQFLGGPITQHIRDHSLTLRPIVQVGNLRRSQE
KDMQGPLSSMTSFRPKLQQKQLDPSQSKVSLTRETSAQLTTNNLSAAPVKSGVIPKKSIT
CDPDPRKHPSQTGVQPTQSGRPTTLDPLHNDSSTLPKNTQGKAGQPPQRLSTQPPASSNI
SSSSAPTLNTAKNNKLNPISNLLSSLVAKGLISAETESPTMVPSEVPKGSKDQTEIITTS
CSLPVTSISGSAAVPVSSSGDEVDSATKTSLASPQSTSTEIRNLVGFDFRPNVIREFHPS
VIRELWDDFPHNCKVCGIKLKQEELFNRHLEWHATREHGPIKASRSWYAESSDWIAGKAE
YSSESGFNDSVDVHEQKTDSSQLDTMVLADENQCLCVLCGELFEDAYCHERNEWMFKGAV
YMNYSDVNCEMESRNVGPIIHAKCLSENSIVTNLAFLQKQIA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggagagatcgttggacagatcgagagaacccggtcccaagaagcctcgatta
atcgaggaactcagcgcccgacaattacctctacgccctgcggcagttactacgttgccg
tctacgaggttccgagcatatgacagagactccggcggcggcggagggtatcagccgcag
cctccgccgcaccaagagcttgtgattcagtacaagaccgcgcttgctgagctcactttc
aattcgaagccaataattaccaacttgactattattgctggagagaacttgtctgctgcc
aaggcaattgctgccaccgtttgtgctaatattatagaggttccgagtgatcaaaaactg
ccatctctttatctcttagacagtattgtgaagaacattggacgggattatataaaatat
tttgcttccagactacctgaggtattctgcaaggcttacagacaggttgatccttgtgtt
cattcaagtatgaaacatctttttggaacttggaaaggagtctttcctcctcagtccctt
cagatgattgagaaggaacttggctttgcacctgcagtcaatagttcagcttcagtatct
gctacagtcaggagtgatttgcagtcacaacgcccacctcatagtatccatgtgaatccc
aagtatttagaaaggcagcgtcttcagcagtcaagtaggagtaaaggagtagttaatgat
atgactgaagctgttttaaactcaaatgaggatttggagaggccagatagagctttgagt
gctgctcgaccatggctggatcctaggattaacatgctttgctgtatattgcagaataat
cagcacacacatagagatgcatttaatgattctgttcctgaaaagagcatggatgggtca
tcatacggaggcagtgaatatagttctgtcatttcaagtaatttgggttcaggggctgga
agaactggaagtaagctcattgatttaggacatgacagaacatggttcaaaacagatggt
ggtgatgcagatactacatctgggcaaagaaatggtttcaatctgaagcatagtttttct
aatcatgaagcaccaaagtccatgaatttggatgcacattgtcagccgagacaaagcata
actaacaaacagaacgatgtgatgtcatgtaactggaaaacttctgaagaagaggagttc
atgtgggatgagattgacaatggtttgattgatcatggacccaatgtatcaaaaactttg
agcacggacacatggatggcagatgttgaaaatttggaaggtgaagatcacctccaaatt
acacgcccttttggggcaaaggtcaatagagaaatatccactgttaagaatcaattacct
ggtttggggggccatccaccatcatcgtggcaattgcagaatctaaagccaggctactca
gaaggatttgtgtcctctcatagtgccttaccagccaatgcaagttctttgactgtcaag
aaggggaaccaatcctttatgtcgaattcggtagtaggaagggtcaaatttgtgggacaa
caatttgattctggggaaactgaatccccttcttggcagtcacctttgcggcaacagtct
ccatcactgccaggaacagtacaccaccctcattcaatgcaaaattttgctgaccaagaa
ttaccccagaatctcaaaacctctcaatttttgggaggtccgataactcagcatattaga
gatcactcccttacgctacgcccgattgttcaggttggtaacttgcgaagatcacaggaa
aaggacatgcagggcccgttatcttccatgacttcttttcgaccaaagcttcagcaaaag
cagctggacccgtctcagtctaaagtttctttaaccagagaaacttcagcacagttgacc
acaaataatttgtcagctgcacctgtcaagagtggagtcatccccaagaaatcaattacc
tgtgatccggatccaaggaagcatccatctcagactggggttcagcctactcagtctggt
agacctaccacattagatcctctgcataatgactcatctacactgccaaaaaacactcaa
ggaaaggctggacaaccaccacaaaggctttctactcaaccacccgcttcctctaacatt
agcagttcctcagctccgaccttaaatactgccaaaaataataaactaaatccaatttca
aaccttttaagctcattggttgcaaagggtttgatatctgcagaaacagaatcaccaact
atggtaccaagtgaggttccgaagggatccaaagatcaaactgaaataattaccaccagt
tgttctttaccagttacatcaatttctggttctgcagctgtcccagtatcgtcttccgga
gatgaggtagattctgctacaaaaacctctctcgcctcacctcaatcaactagcacggaa
atcagaaatcttgttggctttgattttagacctaatgtaattcgagaattccacccatca
gtaattagggaattatgggatgatttccctcataattgcaaagtttgtggtattaagctt
aaacaagaagaactgtttaatagacatttggagtggcatgccacaagagaacatggtcca
attaaggcatcaagaagttggtatgctgagtctagtgactggattgctggcaaggcagaa
tattcatctgagtctgggtttaatgattctgttgatgtacacgaacaaaaaacagacagc
agtcaattggatacgatggttctagcagatgaaaaccagtgtctgtgtgtattgtgtggc
gagctatttgaagatgcgtactgtcatgaaaggaacgagtggatgttcaaaggggccgtt
tacatgaactattcagatgtcaactgtgagatggaaagtagaaatgtgggtcccatcatt
catgccaaatgcttatcagagaactcaatcgtcaccaatttggcctttctacaaaaacag
attgcataa
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