Geobacter sulfurreducens KN400: KN400_3226
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Entry
KN400_3226 CDS
T01940
Symbol
hemD
Name
(GenBank) uroporphyrinogen III C2,C7-methyltransferase and uroporphyrinogen III synthase
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk00860
Porphyrin metabolism
gsk01100
Metabolic pathways
gsk01110
Biosynthesis of secondary metabolites
gsk01120
Microbial metabolism in diverse environments
gsk01240
Biosynthesis of cofactors
Module
gsk_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
KN400_3226 (hemD)
Enzymes [BR:
gsk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
KN400_3226 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
KN400_3226 (hemD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
ADI86038
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Position
3505149..3506696
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AA seq
515 aa
AA seq
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MTMSTASRTNCLVYLIGAGPGDPGLITVRGRECIARADVVIYDYLANDELLSFARPDAEL
IYAGKVGGQHNRAQWQINELLVRKALEGRIVARLKGGDPFVFGRGGEECEALVTAGVPFE
VVPGVTAGIGAAAYAGIPLTHRNVTTSVAFVTGHESPGKKSSDIDWEGLSLGSGTVVFYM
GVKSLPHITENLMAHGRRADTPVALVRWGTRPEQEVLVGTLADIADKVRRTGFKAPAITV
VGEVVRLRKTLRWFDNRPLFGRSIMVTRAADQAGEFSVMLRSLGARVLECPTIAIVPPES
WDDLDSAISRIDTFDWAIFTSFNAVRFFFQRLDAAGRDSRALGACRICVVGPKTAEALAP
YGIRPDLVAADYKGEGVIEALRDVPLAGKRVLFPKGDRARDVIPTGLAAFGAHVEAPVAY
RNAAPDALPAGTIEELEDRRIHCVTFTSSSTVQNLAAILGENRMLHLLEGVIIASIGPIT
SRSCRELGLQVHIEPQEYTLAALTAEMVRHFSAPA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtccacagcttcccgcaccaattgccttgtctacctcatcggcgccggcccc
ggcgacccgggcctcattacggttcggggccgggaatgcatcgcacgggccgatgtggtc
atttacgattacctggccaacgacgaactcctctccttcgcccgtcccgatgcggaactc
atttatgccggcaaggttggggggcagcataaccgggcccagtggcagatcaatgagctc
ctggtccgcaaggcgcttgagggacgcatcgtggcgcgcctcaagggtggtgatcccttc
gtcttcggccggggcggcgaggagtgcgaggccctggtcaccgccggcgtacccttcgag
gtggtgccgggagtgactgcgggaatcggggcagcggcctacgccggcatcccccttacc
caccgcaacgtcaccacatcggttgcctttgtcacgggtcacgagagcccgggcaagaaa
tcatcggacatcgattgggaggggctctccctcggcagcggcactgttgtgttttacatg
ggagtcaagagtctcccgcacattacggaaaacctcatggcccacggccggcgcgccgac
accccggtggccctcgtccgctggggaacccgaccggagcaggaagttctggtgggaacg
ctggccgacatcgccgacaaggtccgccgcacagggttcaaggcaccggccataaccgtt
gtgggcgaggtggtccggctgaggaaaacgcttcgctggttcgacaaccggccccttttc
ggtcgcagtatcatggtcacccgcgccgccgaccaagcgggcgaattcagcgtcatgctc
cgttccctgggcgcacgggtgcttgagtgtcccaccatcgccatcgtgccacccgagagc
tgggatgacctcgacagcgccatcagccgcatcgatacctttgactgggccatcttcacc
tcattcaacgcggttcgcttcttctttcagcggctggacgccgcgggccgtgactcgcgc
gccctgggagcctgccggatctgcgtcgtgggcccgaaaacggccgaagcccttgcgccc
tacggaatccggcccgacctggtggccgcagactataaaggggaaggggttatcgaggcg
cttcgcgacgtaccgttggccggcaagcgggtcctgtttcccaaaggggaccgggcgcgg
gacgtgatccccacgggccttgcagccttcggcgcccatgtcgaggcgccggtcgcctac
cgcaacgctgcgcccgacgccctcccggccggcactatcgaggaactggaggaccggcgc
atccactgcgtaacgtttacctcttcttccaccgtgcagaacctggcggccattcttggg
gagaacagaatgctccacctgttggaaggggttattatagcctccatcggccccatcacc
tcccgcagttgccgcgagctggggctgcaggtccacatcgagccgcaggagtacaccctg
gcggctctcaccgctgagatggtccgccacttctcggcacccgcctga
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