Galdieria sulphuraria: Gasu_11930
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Entry
Gasu_11930 CDS
T02926
Name
(RefSeq) ATP-dependent RNA helicase
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_11930
03041 Spliceosome [BR:
gsl03041
]
Gasu_11930
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_11930
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_11930
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Gasu_11930
mRNA cycle factors
Common to processing body (P body) and stress granule
Gasu_11930
Spliceosome [BR:
gsl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Gasu_11930
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Gasu_11930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
17090157
NCBI-ProteinID:
XP_005708037
UniProt:
M2XMV0
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MTQDAYGTRNNSANESTRKYIPPHLRRERRIGEEDKYDRLSFPKSNFTSGSGRNFGRESF
RDESRSRTFTDRRTEGRPMKRFPSKENGYRSGFGERGEPNRRQFFNRNNREWKDFTGKER
FYADPFKGNENNHFQDEDIEPGTTTGINFDHYDDIPVEISGSDCPDEVLSFDESNLHSRI
LTNVKLSNYLKPTPVQKNAIPVILNGRDMMACAQTGSGKTAAFLLPTIHNMLKMGGPAPV
PEKPLDRGYSKIQFPTTLVLAPTRELAMQIYQEARKFCYCTGIIPCVIYGGINIRIQFES
VAKGCDILVATPGRLVDMIERGKISLMNIKFLILDEADRMLDMGFEPQIRQIVERTDMPT
TGERQTLMFSATFPKEIQRLASDFLYDYIFLAVGRVGSTTDFILQRLERVEEHEKRDFLL
NLIDTVSGLTLIFMQTKRGADELEYFLTRKGYPAISIHGDRSQVEREEALHSFRTGRTPI
LVATDVAARGLDIPNVTHVVNFDMPTDVDDYVHRIGRTGRAGNSGLATAFLNDNNIGIAR
SLIDILIESGQEVPIWLEDMAERAQMNARRGGRGRFGGKDFRRENNSRVERKTFNSGRRN
DSHMNDHYRNFNNSESVNKDSAWF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggatgcttatggtactcgaaataattcagcaaatgagtctactagaaaatat
attccaccacacttaagaagagagagacgtattggagaagaggacaaatatgacagacta
tcttttcctaagagcaacttcaccagtggttctggtcggaactttggacgtgaaagcttt
cgtgacgagtcgagaagcagaacctttacagacaggagaacggaaggccgccctatgaag
cgttttccctccaaagaaaacggttacagaagtggttttggtgaacgcggggagccaaac
cgcaggcaattcttcaacagaaacaacagagaatggaaagactttactggaaaggagcgg
ttttatgcagaccctttcaagggtaacgaaaataatcattttcaagatgaagatattgaa
ccaggcacgacaactggtataaatttcgatcattatgatgatattccagtagaaatatcg
ggtagtgactgtcctgacgaagttcttagctttgatgaaagcaatttacactcgagaatt
ttgacaaacgtgaagctgtcaaattatttaaagccaactccggtgcaaaagaacgctatt
cctgttattttgaatggcagagatatgatggcttgtgctcaaacaggctctggaaagact
gctgcttttcttcttcctacaattcacaatatgttgaaaatgggaggaccagcacccgta
cctgaaaaaccccttgataggggttacagtaaaattcaatttccgactactcttgtccta
gctcctacgagagaactggctatgcaaatctatcaagaagcaagaaaattttgttactgt
actggaattattccttgtgtgatttatggaggtattaatatccgtatacagttcgaatct
gttgcaaagggttgcgatattcttgttgctacgcctggaagacttgtggatatgatagaa
aggggcaaaatttctttgatgaatattaaatttttgatacttgatgaagctgatcgcatg
cttgatatgggctttgagccacaaatacgtcaaatagttgaacgcacagatatgccaaca
acaggagaaagacaaacattgatgttttctgcaacatttcctaaagaaattcaacgctta
gcgagtgattttctatatgattatatatttttagcagttggtcgtgttggttcaactaca
gactttattcttcaaagattagaaagagtagaagaacatgaaaagagagattttcttttg
aatttgattgatactgtttcgggtctcacattgatatttatgcaaacgaaaagaggcgct
gacgagttggaatattttctaaccaggaaaggttatcctgccatttctattcacggagat
cgttcccaggtagaacgagaagaagctttgcattcttttcgtacgggaaggacaccgata
ctcgttgcaacggatgttgcagctcgaggccttgatattcctaacgtcacgcatgttgtc
aattttgatatgccaaccgatgtagatgattatgttcatcgtattggtcgtactggtcga
gctggaaattccggtttagcgactgcatttctgaatgacaacaacattggtattgcaagg
tctttaattgatattctcattgagtcgggacaagaggttcctatatggttggaggatatg
gcagaacgagcacagatgaacgctcgacgaggtggtcggggacggtttggtggaaaagac
tttcgacgagaaaacaattctcgtgtggagcgcaaaacattcaattctggaaggaggaat
gatagtcatatgaatgaccattaccgaaactttaacaacagtgaaagtgtgaacaaggat
agtgcctggttttaa
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