Gynuella sunshinyii: YC6258_04140
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Entry
YC6258_04140 CDS
T03690
Name
(GenBank) DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn03030
DNA replication
gsn03430
Mismatch repair
gsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YC6258_04140
03430 Mismatch repair
YC6258_04140
03440 Homologous recombination
YC6258_04140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsn03032
]
YC6258_04140
03400 DNA repair and recombination proteins [BR:
gsn03400
]
YC6258_04140
Enzymes [BR:
gsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YC6258_04140
DNA replication proteins [BR:
gsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YC6258_04140
DNA repair and recombination proteins [BR:
gsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YC6258_04140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_16
AAA_14
AAA_5
TniB
PIF1
AAA_30
AAA_19
ResIII
AAA_18
AAA_2
DNA_pol3_delta
AAA_7
TsaE
Rad17
nSTAND3
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
AJQ96176
UniProt:
A0A0C5VPK1
LinkDB
All DBs
Position
complement(4456086..4458071)
Genome browser
AA seq
661 aa
AA seq
DB search
MSYQVLARKWRPKTFSQMVGQQHVLKALINALQNDRLHHAYLFTGTRGVGKTTIARLFAK
SLNCEQGVSADPCGVCAACVEVDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPTRGRY
KIYLIDEVHMLSNHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFNLKNMSS
EQVVRYLQHILAQEQIDYEESALWLLGRAADGSMRDALSLTDQAIAYGQGRIVESDVSAM
LGTMDRRQIFGLLDALTRRDAKSMLAKIDQVAEFSPDYIALMADILSVLHQVAIAQIVPD
AIDNSEGTKAAIQAIAAANTAEDIQMYYQIGMIARKDMPLAPDMKSGFEMAMLRMLVFSP
EPVAGDLPPLPELDEPEQLHSPAESLSTARTEGVPAEKKSERVSVHNDDAIAAENVLSSG
TPASENIQPEPEPEPEPEPEPEPEPEPEPEPEPVHETPVFAANPSDEMMPFGAYDDVPPE
MPEPAPFPEDLAEFMSESAAYSAVRVPEPVVEEPVMAEPPAAVAEPEQYQNLTELPWVQV
FWQLDLKGMPQSLFSHAQWNGVHDAVLDLTVPRDYENVYNPRHDEQLLAALEKVGFTVRK
VDITFAETEQETPGQYRARKLEEARQSAIVSLKNDPIVQALEQNFGAVLDETTVRPTEQP
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgctcgtaaatggcgacccaaaacattctcgcagatggtaggg
caacagcatgtgcttaaggcactcatcaatgcattgcagaatgatcgtctgcaccatgct
tacctgtttaccggtacgcgtggtgttggtaaaaccactatcgccagactgtttgccaag
agcctgaactgcgaacagggcgtcagtgctgatccctgcggtgtctgcgcggcctgtgtc
gaagtggacgaaggtcgcttcgttgatttgatcgaagtggatgccgcgtccagaacgaaa
gtcgaagatacccgcgaattactagataacgtgcaatatgcgccgactcgtggacgctac
aagatctatctcatcgacgaagtgcatatgctgtccaatcacagtttcaacgcgttgttg
aaaaccctggaagagccgcctccgcacgtcaagttcctgctcgccactacggatcctcaa
aaactgccggtgactgtattgtcacgctgcctgcagttcaatctcaaaaatatgtcatcg
gaacaggtggtcagatacctgcagcatattctggcgcaggaacaaattgattacgaagag
agtgctctgtggctgctgggccgagccgctgatggcagtatgcgtgatgctctgagcctg
actgatcaggctattgcctatggtcaggggcgtattgttgaaagtgatgtcagcgccatg
ttgggcactatggatcggcggcagatttttggtctgttggacgccctgacccgtcgggat
gccaaaagcatgctggcaaagattgatcaggtggcagagttttcaccggattacattgcc
ctcatggcagatattctgagtgtattgcatcaagtggcaattgctcagattgttccggat
gccatcgataatagtgagggcactaaggcagccattcaggcaattgccgctgccaatact
gccgaagatattcaaatgtattaccagatcggcatgatcgcacggaaggatatgccgttg
gcgccggatatgaagtccggttttgaaatggccatgctgcgtatgctggtcttttcacct
gagccagttgcgggtgatttaccacctctgcctgaattagatgagccggaacaattacat
tccccggctgagtccttgtccactgcacggacagaaggcgtgcctgcagaaaaaaagtct
gaacgggtatccgtccataacgatgatgccatagctgcagagaatgtattgtcatctggg
actccagccagtgaaaatatccagccagagccagagccagagccagagccagagccagag
ccagagccagagccagagccagagccagagccagagccagtccatgaaacaccggttttt
gcagcgaatccatcagatgagatgatgccgtttggagcatatgacgacgtcccgccggag
atgcccgaacctgcgccgtttccggaagatctggctgagtttatgtcagaatcggcagcg
tactctgctgtccgggtaccggaacctgtggttgaagaacctgtaatggcagagcctccg
gcggccgttgccgagccggagcaataccagaatttgactgaattgccttgggtgcaggtg
ttctggcagctggatctgaaaggtatgcctcagagtctgttcagtcacgcacagtggaat
ggtgtccatgatgcggtattggatttaactgttccccgcgattacgaaaatgtctataac
ccccgtcatgacgaacaattgctggcggcacttgaaaaggttggctttactgttcgcaag
gtggatattacgtttgccgaaacagagcaggaaactcctggtcagtatcgggctcgaaaa
ctggaagaggcccggcagtccgccattgtcagcctgaaaaatgaccccatcgtacaggcg
ttggagcaaaattttggtgctgtactggatgaaacaacggtacggccgaccgagcaaccc
atttaa
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