Gluconobacter sphaericus: IGS75_05925
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Entry
IGS75_05925 CDS
T07169
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gsp
Gluconobacter sphaericus
Pathway
gsp00521
Streptomycin biosynthesis
gsp00523
Polyketide sugar unit biosynthesis
gsp00541
O-Antigen nucleotide sugar biosynthesis
gsp01100
Metabolic pathways
gsp01110
Biosynthesis of secondary metabolites
gsp01250
Biosynthesis of nucleotide sugars
Module
gsp_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
IGS75_05925 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IGS75_05925 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IGS75_05925 (rfbC)
Enzymes [BR:
gsp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
IGS75_05925 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6600
Motif
Other DBs
NCBI-ProteinID:
QQX92081
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All DBs
Position
complement(1243985..1244548)
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AA seq
187 aa
AA seq
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MKVERLSIPEVILVTPPRFGDNRGFFSETYNVERMGEAGIDLPFVQDNQSLSRQKGVVRG
LHCQLAPYEQGKLVRVTRGAIWDVAVDARTGSPTYGKWCAAELSAENWSQLWIPPGFLHG
FVTLEENTEVQYKCTSLYSKVSERAVIWNCPELKIDWPVSEANAILSDKDKVAPHFAEAK
GWFPYEK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgaacgtctttccattcccgaggtcattctcgtcacgcctccccgttttggt
gacaatcgcggcttcttctccgaaacttataacgtggaacgcatgggcgaagccggcatc
gatctgcctttcgtccaagacaaccagagcctgtcccgccagaaaggtgttgtccgcggc
ctccactgccagcttgcaccttacgagcaaggcaagcttgtccgcgtcacacgcggcgcc
atttgggacgtagccgtcgacgcccgcacgggctccccgacctatggcaagtggtgcgct
gccgaactctccgccgaaaactggtcccaactctggattccgcccggcttcctgcacggc
tttgtcacgctcgaagagaacaccgaagtgcagtacaaatgcacatcgctctacagcaag
gtctccgaacgcgccgtcatctggaactgcccggaactgaagatcgactggcccgtttcc
gaagctaacgccatcctgtccgacaaggacaaggtcgcaccgcattttgcagaagccaag
ggctggttcccgtacgaaaagtga
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