Geobacillus subterraneus: GS3922_16360
Help
Entry
GS3922_16360 CDS
T04323
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gsr
Geobacillus subterraneus
Pathway
gsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GS3922_16360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsr03021
]
GS3922_16360
03019 Messenger RNA biogenesis [BR:
gsr03019
]
GS3922_16360
Transcription machinery [BR:
gsr03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GS3922_16360
Messenger RNA biogenesis [BR:
gsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GS3922_16360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
AAA
Spore_III_AA
AAA_25
NACHT
DUF6417
Motif
Other DBs
NCBI-ProteinID:
AMX85055
UniProt:
A0A143MLZ6
LinkDB
All DBs
Position
3356648..3357922
Genome browser
AA seq
424 aa
AA seq
DB search
MELTLAALENMKLKELYELARQYKISYYSKLTKKELIFAILKARAEQDGLFFMEGVLEII
PSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLHVEAV
NGEDPEIAKERVHFPALTPLYPNRQMKLETTPDKLSTRIIDLIAPVGFGQRGLIVAPPKA
GKTMLLKEIANSITANHPDVELIVLLIDERPEEVTDIERSVQGDVVSSTFDEVPENHIKV
AELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
AARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIRR
SGTRKEELLIPKEHLDKLWAIRKTMADSPDFIERFLNKLRRTKSNEEFFALLDQEWKSGG
PLRL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggagttaacgttagcggctttagaaaacatgaagttaaaagagctgtatgagctcgcc
aggcaatataaaatttcgtattacagcaaattgacaaaaaaagagcttatttttgctatt
ttgaaagcgcgtgccgagcaagacggcctctttttcatggaaggcgtcctcgaaatcatt
ccgtcggaaggattcggctttttgcgcccgatcaactactccccgagctcggaagacatt
tacatttccgcttcccaaattcgccgttttgatttgcgcaacggggataaagtatccggc
aaagtgcggccgccgaaagaaaacgagcgctatttcggcttgctccacgtcgaggcggtc
aacggggaagacccggaaatcgcgaaagagcgcgtccattttccagcgttaaccccttta
tatccgaatcggcaaatgaagctcgagacaacgccggacaagttgtcgacccgcatcatc
gacctcatcgccccggtcggctttgggcagcgcgggctgatcgtcgcgccgccgaaagca
gggaaaacgatgctgcttaaagaaatcgccaacagcatcaccgccaaccacccggacgtc
gagctgatcgtccttttgattgacgaacggccggaagaagtgaccgacatcgagcggtcc
gtacaaggggatgtcgtcagctcgacgtttgacgaagtgccggaaaaccatattaaagtg
gccgagctcgtcttagagcgggcgatgcgtttggtcgagcataagcgcgatgtcgtcatt
ttaatggacagcatcacccgtttggcccgggcgtacaacttagtcattccgccgagcggt
cgcacgctctccggcgggatcgacccggccgcatttcaccgcccgaaacggtttttcggt
gcggcccgcaacatcgaagagggcggcagcttaacgattttggcgacggccttagtcgat
accggctcgcgcatggacgatgtcatttacgaagaattcaagggaacaggcaacatggag
ctccacctcgaccggtcgctcgctgagcgtcgcattttcccagcgatcgacattcgccgc
tccggaacgcgcaaagaggagttgcttattccgaaagaacatttggataaactgtgggcg
atccgcaaaacgatggctgattctccggactttatcgagcggtttttaaacaagctgcgc
cgcacgaaatcgaacgaagaatttttcgccttgctcgatcaagaatggaaaagcggcggc
ccgcttcgcctctaa
DBGET
integrated database retrieval system
