Gallibacterium salpingitidis: NYR30_08005
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Entry
NYR30_08005 CDS
T09222
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
gss
Gallibacterium salpingitidis
Pathway
gss03030
DNA replication
gss03430
Mismatch repair
gss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NYR30_08005 (holB)
03430 Mismatch repair
NYR30_08005 (holB)
03440 Homologous recombination
NYR30_08005 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gss03032
]
NYR30_08005 (holB)
03400 DNA repair and recombination proteins [BR:
gss03400
]
NYR30_08005 (holB)
Enzymes [BR:
gss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NYR30_08005 (holB)
DNA replication proteins [BR:
gss03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NYR30_08005 (holB)
DNA repair and recombination proteins [BR:
gss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NYR30_08005 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DUF835
HolB_lid
Motif
Other DBs
NCBI-ProteinID:
WKS98717
LinkDB
All DBs
Position
complement(1652366..1653364)
Genome browser
AA seq
332 aa
AA seq
DB search
MVPTTQLAELFWLLPTYQRITQAFLAGYGHHALLIRSANDNGAEPFCFALAQWLFCEHKQ
EGQACGHCRKCQLFQHQSHPDFYLITAEKGKKIGIEAIREVTDKLSRHSQQQAAKVVYIQ
GVELLTEAAANALLKTLEEPTDNCYFLLQTNVEQQILATIYSRCQLWALPLPNQEQGMQW
LSEQGFQQRDEMQVALAMNYGRPFAAKISLQQGKIAQRLAFLRQFWKFYRSRNMLLLMPY
FQQENPIPQLNWLEALLMDALKASLSIHSGWQCEDLRQGVTALAQELPALKIYQGLSIVR
RMRTDLLSINGVNQELIIADGLIEMIEQVFEG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggttccaacaacacaactagccgagttattttggttattgcctacttatcagcgtatt
actcaggcttttttggctgggtatggtcatcacgccttattgattcgtagtgcgaatgat
aatggtgcagaaccattttgttttgccttagcacaatggctgttttgtgaacataaacaa
gaaggacaagcctgtggtcattgtcggaaatgccaactatttcaacatcaatctcaccct
gatttttatctgattacggctgaaaaagggaaaaagattggcattgaagcgattcgtgaa
gtgacggataaattatctcgacatagtcagcaacaagctgccaaagtggtatatattcaa
ggcgtggagttgctgacggaagcagctgccaatgcgttattaaagacgttagaagagcca
acggataattgctatttcttattacaaaccaatgttgaacaacaaattcttgccaccatt
tatagtcgctgtcagttgtgggcattgccattaccaaatcaagaacagggaatgcaatgg
ttaagtgagcaaggttttcaacaacgagatgaaatgcaagtagcattggcaatgaattat
gggcgtccttttgctgctaaaattagtttgcagcaagggaaaattgcccaacgtttagca
tttttacgccaattttggaaattttatcgcagtagaaatatgctcttgttgatgccttat
tttcagcaggaaaaccctattccacaattgaattggttagaagctttgttgatggacgca
ttaaaagcatccttaagcattcattctggttggcaatgtgaagatttacgtcaaggggta
acagcattagcacaagaattacccgcattaaaaatttatcaagggttaagtattgtgcgg
cgaatgcgtaccgatttattgtcgattaatggcgtaaatcaagaattaattattgccgat
ggcttaatagaaatgattgaacaagtatttgaaggttaa
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